Hordeum vulgare subsp. vulgare (domesticated barley): 123450061
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Entry
123450061 CDS
T11213
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3-like
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123450061
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123450061
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123450061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
zf-C3HC4_2
Rtf2
zf-UDP
zf-C3HC4
zf-rbx1
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-ANAPC11
DUF5817
zf-Nse
WDR55
zf-RING_16
PknG_rubred
Beta-prop_EML_2
IBR_1
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
123450061
NCBI-ProteinID:
XP_044983399
UniProt:
A0A8I6X6T7
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Position
4H:complement(608918037..608922485)
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AA seq
594 aa
AA seq
DB search
MPPRPRGRRASPPVLILEDEDLDFEVSYSEGEDGDYGGGSDSSPSSSSLSGEEGTDVEDG
ARSEEEEEEGEESVAEGCGLAVQARVPGGGATAQRAANAPTCPVCMEPWTSEGEHRISCI
PCGHVYGRSCLERWLTQHGNASATCPQCGRRFKHKDIINIYAPEVAVPNNDLEKQLWFCR
QKLESLEEVVLKQGKLLDEIVAEKNHRSTHGDVGVSKRQKIGEHSDGRTYLEPSASTSAA
SASSNSCLFVLLKELSFDGARVMGIDASNQIILASGKAPGVGGEHVLRKISMLSNHEART
IQLPPDTKVVKDICILPGGSALFASLGKRLSLFSMMTDSVVLQCNLPVSAWSCSAHDSDS
HRVYAGLQDGRVLVFDTRQPSRPLHSMAGLSKHLVHTLHSVTDNSGSRKVLSASAIGPCM
WDADGNQSSPKLLLEDNNQRVCFSLACSPLSSDLLVASYRPKADYSSGDAAPSQVYLSQT
PTQSGAGKLGQHTVITRTGRASFVEGSTCHSNVSEVRMCKSAIVPCGHGEHLFAYGDELH
RGVLTWQLPSLGFHSGLRTHRHQILDLRYAGSPAGGADLGCLSDDKLQVYRVDR
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcgtccccggggcaggcgcgcgtctcctccggtgctgatcctggaggacgag
gacctcgatttcgaggtcagctacagcgaaggggaggacggggactatgggggagggtca
gattcctccccctcctcctcgtcgttgtcgggggaggagggaacggatgtagaggacggc
gcaagatcggaggaggaggaggaggagggggaggagagcgtcgcggagggatgcggactg
gccgtgcaagctagggttcccggcggcggcgcgacggcgcagagggcggcgaacgccccc
acttgtcccgtgtgtatggagccctggacctccgaaggcgagcatcgcatcagctgcatt
ccttgcgggcatgtctacggcagatcttgcctcgagagatggttaacgcagcacggtaat
gctagtgcgacgtgccctcaatgtggaagaaggtttaaacataaggacattatcaacatc
tatgcaccggaggttgcggttcccaataatgatcttgagaagcaattatggttttgcagg
caaaagcttgaatctcttgaggaagtggtcctgaaacaagggaagttgcttgacgagata
gttgctgagaagaatcacaggtcaacacatggtgatgttggtgtctcaaaacgacagaaa
ataggcgagcactcggatggaagaacatatctggaaccgtcagcctcaaccagtgcagcc
tcagcctctagcaacagttgcctctttgttttactgaaggaattatcttttgatggcgct
cgagtcatgggtatagatgcatctaaccaaataatacttgcttctgggaaggcacctggt
gtgggtggagaacatgttcttagaaagattagcatgctatccaaccatgaagcacgtaca
atacagcttcctcctgatactaaagttgttaaggacatatgtatcttgcctggtggctct
gctctttttgcatcactaggcaaaaggctctcactctttagcatgatgaccgacagtgtt
gttcttcaatgtaatttaccggtttctgcttggtcatgttcagcacatgactctgattca
catcgcgtttatgctggcttgcaggatggcagggttttggtatttgatactcgtcagcct
tcaagacccttgcattccatggcggggctatctaaacatctggtccatacactccactct
gtcactgataacagcggttccagaaaggttctttcggcttctgctatagggccttgcatg
tgggatgctgatggcaatcaaagcagtccgaagctactactagaggataataaccaacgc
gtctgcttctctcttgcttgttcccctctatcgagcgatctgttggtagcctcctaccgg
cccaaggctgattactcatcaggagacgctgctccctctcaagtgtacctatcacagacg
ccgacgcaatctggtgcaggaaaactgggtcagcacaccgtcatcacgaggacaggcagg
gcatcctttgttgagggcagcacatgccactccaacgtgagtgaagtgcgcatgtgcaaa
tcggcaattgtaccttgcgggcatggcgagcatctcttcgcctacggggacgagttgcac
cgtggggtcctgacctggcaactaccttcccttgggttccactctggcctgagaacccac
cgtcatcagatcctcgacctaagatatgcgggaagtccagcaggaggtgcggacctcggg
tgcctgagcgatgataagttgcaggtttacagagttgatagatag
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