Hordeum vulgare subsp. vulgare (domesticated barley): 123451010
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Entry
123451010 CDS
T11213
Name
(RefSeq) protein argonaute 12-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvg03019
]
123451010
03036 Chromosome and associated proteins [BR:
hvg03036
]
123451010
Messenger RNA biogenesis [BR:
hvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123451010
Chromosome and associated proteins [BR:
hvg03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123451010
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
123451010
microRNA pathway
RISC loading complex
123451010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoMid
ArgoL2
Motif
Other DBs
NCBI-GeneID:
123451010
NCBI-ProteinID:
XP_044983961
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All DBs
Position
4H:complement(9063281..9071942)
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AA seq
910 aa
AA seq
DB search
MERRLAVSQAVQGSSSSAPAPAATGAQESSQVAVAVPPRNLPPASSKSTEFPARPGYGTV
GKRCRVRANHLLVQVADKLEMYHYDVSISPESMARERNRSIINELVRLHKQYLDGRLPAY
DGRKGMFTAAPLPFKTKEFLVKVSNPERGYQGEKEYKVTIKEVAKLDLYNLQQFLAGRQR
ELPQDTLQALDIALRETPTAKFTPISRSFFSKSFGHDGDIGSGVECWRGYYQSLRPTQMG
LSLNIDISATAFYKAQPVMNFALEYLNIRGDAPRRLFDQDRLKLKKALKGVRVVATHRPD
ISIRYKITGITSAPLNELTFDLDGTRVSVVQYFKRQYDYSLKYIQWPCLQAGSDSRPTYL
PMEVCNILGGQRYSRKLNERQVTNILRLACERPERREGSTVEVINRNNYGIDDNAKEFGI
KVMSQLALVDARVLPPPRLKYHQSGREQICNPSVGQWNMNNKRMISGGSIRHWACISFGS
RLHWNDVSVFCNNLVDTCNKMGMQVSETPCVDIVQARQVNLEAVKNIYRQSSQVLSQQGL
AGQNLELLIVVLPEGTPSDCYGRVKRLCETELGLITQCCLPKHVQKAGSQYLQNMALKIN
VKVGGRNTVLENALLRRIPLLTDKPTIIFGADVTHPSPGEDVSPSIAAVVASMDWPEVSK
YTCLVSSQGHREEIIADLFTEVKDPQKGVIYGGMIRELLLSFYKANNSCKPGRIIFYRDG
VSEGQFSQVLLYEMDAIYRACSSLENGYLPQVTFVVVQKRHHTRLFPEDHRSGALADRSG
NVLPGTVVDTKICHPSEFDFYLCSHAGIQGTSRPTHYHVLFDDNNFTADALQTLTYNLCY
TYVRCTRSVSIVPPAYYAHLAASRARHYLDENHSDQGSSSVGGTLRHDQAVPVKPLPKVK
ESVRQFMFYC
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaggttggcggtgtcgcaggcggtccaggggtcttcgtcctcggcaccggcg
ccggccgccacgggagcccaggagtcgtcgcaggtggccgtggccgtgccgcctcggaat
ctgcctccggcgtcgagcaagtcgacggagttccccgcgcggccggggtacgggacggtt
ggcaagaggtgccgggtgcgtgccaaccatctcctcgtgcaggtcgccgacaagctggag
atgtaccactacgatgtatcaatcagtcctgaatcgatggctcgtgagcgtaacagatcc
ataattaatgaacttgttagattgcataaacaatatttggatgggagattgcctgcttat
gatggaagaaagggaatgtttactgcagccccgctgccatttaaaaccaaagaatttctt
gtcaaagtatcaaatcccgagagaggataccagggggaaaaagagtataaggtcaccata
aaggaagttgcaaaactagatctatacaatcttcagcaattcttggctggtaggcagaga
gaactgccgcaagacactctccaggctcttgatatcgctctgagggaaacccccactgca
aagtttacacccatctcaagatcatttttctcaaaatcatttggacatgatggtgacatt
ggcagtggagtggaatgctggcgagggtattatcagagcctacgccccacacagatggga
ttgtcactgaatattgatatttctgcaacagcattttacaaagctcaaccagttatgaat
tttgcactggaatatcttaacatccggggtgatgctccaaggcgtttgtttgatcaggat
cgtctgaaactaaagaaagccctcaagggagtccgagttgtggccacgcatcgacctgat
atatccattcgttacaaaattactgggataacctcagctccgttaaatgaattgacattt
gatctagacggaacaagggtatcagttgtccagtactttaaacgacaatatgattactct
ttgaaatatatacagtggccatgccttcaggctggcagtgatagcaggccaacatatttg
ccaatggaggtttgcaacatacttggaggacaacgctattcgagaaagctaaatgagcgc
caagtcacaaacatattgaggttggcatgcgagcgtccagaaagaagggagggtagtacc
gtggaggttattaatagaaacaactatggcattgatgacaatgcaaaagaatttggaatt
aaggtgatgagccaactagcactggtcgatgctcgtgtgctgcctcctccaaggcttaaa
taccatcagtctggacgagaacaaatatgtaatccgtcggtaggacagtggaacatgaat
aacaagagaatgatcagtggagggtccatcaggcactgggcctgtatttcatttggttct
cggttgcattggaatgacgttagcgtgttctgcaacaatttggttgacacgtgcaataaa
atgggcatgcaagtaagtgagacaccgtgtgtggacattgttcaggcgcgccaggttaac
ttagaagctgtaaaaaatatatatagacaatcttcccaagtgctttctcagcaaggtttg
gcaggacaaaaccttgagttactaattgtagtattacctgagggaactccaagtgattgc
tatggaagagtaaagcgactttgtgaaactgagcttggtttaataactcagtgctgttta
cctaagcatgttcagaaagctggctcccagtatctacaaaatatggcccttaagatcaat
gttaaggtcggtggtcggaacaccgtactggaaaatgcattgcttcggaggatacctctg
ttgacagataagcctacaattatatttggagcagatgtgacccacccatcacctggggag
gatgtgtctccatctattgcagcggttgttgcgtcgatggattggcctgaagtgtctaag
tacacatgcttggtgtcttcacaaggtcatagggaagagatcatagctgaccttttcaca
gaagtgaaagatccacagaagggggttatatatggtggaatgataagagaattgcttttg
tccttctataaagcaaacaattcttgcaaacctggaaggataatattttatcgagatggt
gttagcgaaggccaatttagccaggtcttgctttatgaaatggatgcaatatacagggct
tgttctagcttagagaacggataccttcctcaagttacatttgttgtggtacaaaagcgg
catcacacacggcttttccctgaagatcatcgttcaggggccctggcagatcgaagcgga
aacgtcctacctggaaccgttgttgatacaaagatatgtcatcccagtgagtttgatttt
tacctctgtagtcacgccggcattcagggcacgagccgtccaactcattatcatgtcctc
ttcgatgacaataatttcaccgcggatgcgctgcaaacactgacttacaacctgtgctac
acttatgtacggtgcacgcgatccgtctcgattgttcctccagcatactacgcacacttg
gcagcttcgcgggcgcggcactacctggatgagaatcactctgatcagggatcatcttct
gtgggcggcaccctaaggcatgatcaagctgtcccggtaaagccactgcccaaagttaag
gagagtgtcaggcagttcatgttctattgctga
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