KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123451027
Entry
123451027         CDS       T11213                                 
Name
(RefSeq) denticleless protein homolog isoform X1
  KO
K11790  denticleless
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hvg04121]
    123451027
Ubiquitin system [BR:hvg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     123451027
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 DSE1_N Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_NOL10_N Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_SCAP Beta-prop_EIPR1 ASA1 Beta-prop_DCAF12 Beta-prop_WDR41 Beta-prop_DCAF4 ANAPC4_WD40 Beta-prop_VPS8 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_WDR11_1st MIOS_WD40 PAC11 Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Ge1_WD40 Beta-prop_Nup120_160 Prim-Pol TRM82_WD
Other DBs
NCBI-GeneID: 123451027
NCBI-ProteinID: XP_044983978
UniProt: A0A8I6Y4E4
LinkDB
Position
4H:complement(12667148..12670743)
AA seq 522 aa
MAMRRPPSFFGGLRARELSGGRAPARASAARLPYLSDLSSDPGGRGCGVISVEHSGVVAI
PFAVSFCKAPQISRLLAVADEDGYVALYDTRRRLPSRSSSTEKSAETRLSDWVAHNNAIF
DVCWIKEGSQLLTASGDQTVKIWSVENKKCLGVLSGHTGSVKSLSCHSSNPDLIVSGSRD
GSFALWDLRCDPKTPNGHGEACLISSAVVKEAHSPTRRNRTRSRAKGASTSITSVLYLKD
DISIATSGAADNIVKFWDTRNLKAPVSNKTSQSTAQPSKEGVTHGISSLSQDSYGAYIAA
SCMDHRIYLYSTLHMDKGPIKTYTGSKIESFFVKSAISPDGTHILGGSSDGNVYLWQVDQ
PESGPIVLKGHGGEVTSVDWCALEVGKVASSSDDATVRVWNTKKIDCTNISSPTVIRKRV
TAPIIDCPRSASHERTTASRDVAACTSAGSELPGSHSPLRPRVLEFGTPESVKKRAFSLF
QEEALDTRNSPGAQMSSPSSVLNPPPSLKRKTIRDYFGSSTS
NT seq 1569 nt   +upstreamnt  +downstreamnt
atggcgatgcggcggccgccgtccttcttcggcggcctccgggcgcgggagctcagcggc
ggcagggcccccgcgcgcgcctccgcggcgcggctcccctacctctccgacctctcctcc
gaccccggcggccgcggctgcggcgtcatctccgtcgagcactccggcgtcgtcgccatc
cccttcgccgtctccttctgcaaggccccgcagatctctcgccttctggcggtcgccgac
gaggacggctatgtcgccctttacgacacccgccgccgcctcccgtccagatcctcgtcc
accgagaagtcagctgaaacgaggctgtccgattgggttgcccacaacaatgccatcttt
gacgtgtgctggatcaaggagggatcccaattactgacagcatcaggcgaccagactgta
aagatatggagcgtggagaataagaaatgccttggcgttctgtcagggcacactggaagt
gtcaagtcactgtcatgccattcttcaaatcctgatctgattgtttccggttctagagat
ggttcttttgcactttgggatctaagatgtgaccccaaaaccccaaatggtcatggtgaa
gcatgcctcatatcttctgctgttgtcaaagaagcacacagtcccacccgaaggaatcgg
acaaggtctcgagcaaagggagcttcgacgagcatcacatcagttctttatctgaaagat
gatatctccattgctacttctggtgccgcagacaacattgtgaaattctgggatacacgg
aaccttaaagcgcctgtctccaacaaaacctctcaatcaacagcacaaccttctaaggag
ggggtgacacatgggatctcgtccttgtctcaagactcatatggtgcttatattgccgcg
tcatgcatggatcacaggatctatctgtatagtactctccacatggacaagggtccaata
aagacttacacgggaagcaaaattgagtctttctttgtcaagtctgctattagtcctgat
gggactcatattttaggtggttcaagcgatggcaatgtttacttgtggcaggtggatcaa
cctgaaagtggccctatagttctgaaaggccatgggggtgaagtcacttcagttgactgg
tgtgctttggaggttggaaaggtagcatcatcatctgatgatgccacggttcgtgtatgg
aacaccaagaaaatagactgcaccaacataagctccccgacagtcatccgtaagagggta
actgcgccaatcattgactgcccaagatcggctagccatgagcgaacgactgcttcaaga
gatgtagcagcctgcaccagtgctggcagtgaattgccaggttcacactcccctctccgg
cccagagtactggagtttggcacgcctgagtctgtgaaaaagagagccttttcattattc
caggaggaggccctggatactaggaacagcccaggagctcaaatgagcagcccctcctcg
gtcctgaacccaccgccttcgctgaaaaggaagactatccgggactactttggcagtagc
acatcttga

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