Hordeum vulgare subsp. vulgare (domesticated barley): 123451134
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Entry
123451134 CDS
T11213
Name
(RefSeq) presenilin-like protein At2g29900
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
123451134
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hvg01002
]
123451134
Peptidases and inhibitors [BR:
hvg01002
]
Aspartic peptidases
Family A22: presenilin family
123451134
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Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
123451134
NCBI-ProteinID:
XP_044984077
UniProt:
F2EGF7
A0A8I6XCL0
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All DBs
Position
4H:38653869..38655510
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AA seq
465 aa
AA seq
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MADEGPAPAAAAAVPVGRAAATILDSLGEDITRIVGPVSACMLIVVLLVSLLSSPSSPSP
LTASIAAAAGPGGGGGDDIASAAVTAVTFVAIVTAATFFMALLFYFRCTPCLRAYLGLSA
IWILLLLGGQMCLLLLSRLRLPLDVVSCALLLPNAAAALAVAAISPASVPIALHQAALLA
IAVLTAFWFTLLPEWTTWALLVAMAVYDLGAVLIPGGPLRVLLELAIERNEEIPALVYGA
RPVDPRHGHNWRLWRERGQQLGGDLDPSSTVEVIGEVLGRNPLPSSGGNSPNSASQAGEQ
TNLTGAVSNSRLRESQVPDLSSGSANAQAREALALPETRLDIAELRVPLIQPQPDRTSYD
DDDDDDTDEDGIGLASSGAIKLGLGDFIFYSVLVGRAAMYDYMTVYACYLAIIAGLGITL
LLLAFYRKALPALPVSISLGVLFYVLTRTLLEAFVMQCSTNFLMF
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgagggcccagcccccgcggccgcggccgccgtccccgtcggccgggcggcc
gccaccatactcgactccctcggcgaggacatcacccgcatcgtcggcccggtctccgca
tgcatgctcatcgtcgtcctcctcgtctccctgctctcctccccctcgtccccgtccccg
ctcaccgcctccatcgccgccgccgccggccccggcgggggcggaggcgacgacatcgcc
agcgccgccgtcaccgccgtcaccttcgtcgccatcgtcacggccgccaccttcttcatg
gcgctgctcttctacttccgctgcacgccctgcctccgcgcctacctcggcctctccgcg
atctggatcctcctgctcctcggcggccagatgtgcctcctcctcctctcccgcctccgc
ctcccgctcgacgtcgtctcctgcgcgctgctcctccccaacgcggccgcggcgctcgcg
gtcgccgcgatctcgccggcctccgtccccatcgcgctccaccaggcggcgctcctcgcc
atcgccgtgctcaccgccttctggttcacgctgctccccgagtggaccacctgggcgctg
ctcgtggccatggccgtctacgacctcggcgccgtcctcatccccggtggccccctgagg
gttcttctcgagctggccattgagaggaacgaggagataccggcgctggtctacggggca
aggccggtggatcccaggcacggccacaattggcggctttggagggagagggggcagcag
ctcggcggggatttggaccccagctccacagttgaggtgattggtgaggttttggggaga
aatcctcttcccagttcaggtggcaattcacccaattcggcgagccaagctggggagcag
acgaacttgactggtgctgttagcaattcaaggctcagggagtcacaggtgccggatttg
agctctggttctgccaatgcacaagccagagaggcgcttgcattgccggagactaggctg
gatattgctgaactgagggtaccgttgatccagccacagccagatagaaccagctacgat
gatgacgacgacgatgacaccgatgaagatggcattgggttggcctcatcaggggcaatc
aagcttgggctgggagacttcatattctacagcgtgctcgtcgggagggcggctatgtac
gactacatgacagtctacgcttgctaccttgccatcattgcggggctcggcatcactctg
ctactgctggcattctaccgcaaggcattgcccgcactaccggtgtccatctccctcggc
gttctgttttacgtgctcacaagaacattgctcgaggcatttgttatgcagtgctccaca
aactttctgatgttttag
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