Hordeum vulgare subsp. vulgare (domesticated barley): 123451206
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Entry
123451206 CDS
T11213
Name
(RefSeq) uncharacterized protein LOC123451206 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123451206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123451206
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123451206
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
123451206
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
123451206
NCBI-ProteinID:
XP_044984149
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Position
4H:complement(63823160..63825379)
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AA seq
624 aa
AA seq
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MFQSTPSIHSPHSTAKEKDRLFPFGRNGALLHSLELPLAECKPLSFSTFFSHVGSSLRSI
LQLGAQIRRGSMEEQKKPADQQNKRQRVSENAESSNKKPSHMNGLKVHLGQPVGVSPNPG
VTGTRPLASPSPFAKAKPIAVVKPAAATVTVTGPVDTMAPASAAPSPVAKAKPTAATVTV
TGPVDTMAPASAARIPVAKAKPTAAMVTVTGPVATMAPVSAAPNPVAKAKPTAATVTVSG
PVATMSPVQAAPNPVAMKTPTPAAPSPVVTMAPAAPSPVATMTLAQVAPSPVATKTPASA
EPSVVTTKTPAVAASIPVASATPATLVNPPATVKREPELGGVLEFDEQVAAAMIAVTPAE
EETVILEVKKKWLHCAACPAPLKRPVFKCGDGHVVCSDCGCGGGANKHCDLCGRATTYTH
VPYMDGLVGAYKVPCPYRNLGCARYIAYHSAADHQAKCAHAPCYCFECAFQGSTASLLRH
LTEVSGRHCWPMEKIKYQISHPLVVPASEHRLLLVAEEDGGVFLLAVGAGRGRAGVCPVT
VVCVRGNVHADARPVYTGVLWVDGPPAAAGHLRSSIQLKGDVANCRVPGDVDMEHGRLHA
HVNPEMLHGESKEIHLGICITKFW
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgttccaaagcacgccatcaatccacagtccacactccactgctaaggagaaagaccgt
ctcttccccttcggacgaaacggcgctctcctccatagcttggagcttcctcttgccgaa
tgtaagcctctctctttctctacatttttctcgcatgttggatcctcactccggtcaatc
cttcagctgggcgcgcaaattcgccggggatctatggaggaacaaaagaaaccggcggac
cagcagaacaagaggcagcgggtttccgagaacgccgagagcagcaacaagaagccgagc
cacatgaacggactaaaagttcatttgggtcagcccgttggagtttcccctaatccagga
gtcacggggacaaggccgttggcctcgcccagtccgtttgccaaggcgaagccaatcgct
gtggtgaagccagcggccgctacggtgacagtaaccggtccagtggacaccatggcaccg
gcatcggcggcgcccagtccggttgccaaggcgaagccaacggccgctacagtgacagta
accggtccggtggacaccatggcaccggcatcggcggcgcgcattccggttgccaaggcg
aagccaacggccgctatggtgacagtaaccggtccagtggccaccatggcaccggtatcg
gcggcgcccaatccggttgccaaggcgaagccaacggccgctacggtgacagtaagcggt
ccagtggccaccatgtctccggtacaggcggcgcccaatccggttgccatgaagacgccc
acgccggcggcgccaagtccagtggtcaccatggcaccggcagcgcccagtccagtggcc
accatgacactagcacaggtggcgcccagtccggtggccacgaagacgccggcgtcggcc
gagcccagtgtagtgacaacgaagacaccggcggtggcggcttccatcccagttgcttcg
gcgacgccggccaccctggtgaacccaccggccacggtgaagcgtgagccggaactcgga
ggggtgctggaattcgacgaacaagtagcagcagccatgatagccgtgacaccagcggaa
gaggaaaccgtcatcttagaggtgaagaagaaatggcttcactgcgccgcgtgccccgcg
cccctcaagcgtcccgtattcaagtgcggggatggacatgtcgtgtgctccgactgcggc
tgcggcggcggagcgaacaagcactgtgatttgtgcggccgcgccaccacctacacccac
gtcccctacatggacggcctggtcggtgcctacaaggtgccgtgcccctacaggaatctc
ggctgcgcgaggtacatcgcctaccactcggccgcggaccaccaggccaagtgcgcgcac
gcgccctgctactgcttcgagtgcgcgttccagggctccaccgctagcctcctgcgccac
ctcacggaggtgtccggccggcattgttggcccatggagaagatcaagtaccagatctcc
cacccgctcgtcgtgccggcgtcggagcaccgccttctgctagtggcggaggaggacggc
ggcgtgttcctcctggccgtgggtgcggggaggggaagggccggcgtctgccccgtcacc
gtcgtgtgcgtcaggggaaatgtccacgccgacgcaaggccggtgtacacaggcgtgctc
tgggtggatggccctccggccgccgcaggccatctcaggagcagcatccagctgaaaggc
gacgtggcgaactgcagagtccccggcgacgtggacatggagcacgggcgcctccatgcg
catgtcaatccggagatgctgcacggggagtccaaagagattcatctgggcatttgcatt
accaagttctggtga
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