Hordeum vulgare subsp. vulgare (domesticated barley): 123451881
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Entry
123451881 CDS
T11213
Name
(RefSeq) SWI/SNF complex subunit SWI3C homolog
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123451881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvg03021
]
123451881
03036 Chromosome and associated proteins [BR:
hvg03036
]
123451881
Transcription machinery [BR:
hvg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123451881
Chromosome and associated proteins [BR:
hvg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123451881
PBAF complex
123451881
GBAF(ncBAF) complex
123451881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
SANT_DAMP1_like
DUF4428
Motif
Other DBs
NCBI-GeneID:
123451881
NCBI-ProteinID:
XP_044984363
UniProt:
A0A8I6XMD7
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Position
5H:241784256..241798495
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AA seq
781 aa
AA seq
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MPRKASSSSDAKLKWRKRKRSQDTSPSKQSGGADHSDDSDSAAANDEDDALHGSANGGET
LGARGGDDDTVPDLREAEVLSSAEPVSGFPSATRRTISRLHPSVLAIIAADRALAAGASC
ASAPPAPALENISHGQLQVLAAMLPDHPSLSNDPDKPSSYVCTVPPLMECQGVPKQFYSK
LLVVPRHSDWFSPATVHRLERQVVPHFFSGKSPGHTPEKYMMLRNKVIVKYLERPSRRLA
FAECQGLVTSTAELYDLSRIVRFLDTWGIINYLAAGSVHRGLRLASSLIREEQTGELQLA
SAPLKSIDGLILFDRPKCSARAEDIASVASTSSALEVPNGDTGFADLDEKIWERLSENFC
SYCSQPLPSLHYESQKEADIALCSDCFHDARFVPGHSSLDFQRVDGMKDGSDNDGDSWTH
EETLQLLDGLEKYNDNWNAIAEHVGTKSKAQCIHHFIRIPVEDGLLESIEVPEASVSSRV
QSNGFSYSNSNGGISGSFPQSSQPGQQLPFVNSANPVMSLVAFLASAVGPRIAASCANAA
LSVLTREDSRMCSDGNDVTGHAARPNYDASSPVSPENVKYAAMCGLSAAATKCKLFADQE
EREIQRLAATIINHQLKRLELKLKQFAEVETLLLKESEQVERARQNLTAQRVRFMSARFA
STGGPMPGGSSSTMVSNPMNQASPRPPAMPGSMPPASMQAFYGNNMQGHPAQMAFLQQQQ
RQQQQMLSFGPRLPLSAIHPGSSSSAAPSVMFNPGMPSSATPNHHSMLRPPSSGSNNSSF
G
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaaggcctcgtcctcctcagatgcgaagctcaagtggcggaagcggaagcgc
tcacaggacacctccccgtcgaagcagtccggcggggccgaccactccgacgactccgac
tccgcagcggcgaacgacgaggacgacgcgctccacggctccgccaacgggggcgaaacc
ctaggcgcccgtggcggtgatgacgacaccgtgcccgacctacgggaggcggaggtgctc
tcctcagcggagcccgtctctggcttcccctcggccacccgccgcactatcagccggctc
catccctcggtgctcgcaattatcgccgctgatcgtgccttggcggctggtgccagctgt
gcttcggctccgcctgcacctgcgctggagaacatttcgcatgggcagctccaggtgctc
gcagccatgctccctgaccatccatccctatccaatgaccctgacaagccgtcttcctat
gtctgcaccgtgcctccactcatggaatgccaaggcgtgcccaagcagttctacagcaag
ttactcgtcgtccccagacactcagattggttctcgccagcgacggtgcacaggttggag
aggcaggtggtgccacatttcttctcagggaagtccccagggcatacaccagagaagtac
atgatgctgaggaataaggtgattgtgaagtatttggagcgcccgtccaggagacttgca
tttgctgagtgccaggggcttgtcacaagcacggctgaattgtatgacctgagtcggatt
gtcaggttcttggacacttgggggatcattaattaccttgcggctggatctgtgcaccgg
ggcttgaggctggcatcatctttaatcagggaggagcaaacaggggagctgcagctggcg
tctgcaccattgaagtcaattgatggtctgattttgtttgatcggccaaaatgcagtgcg
cgagcagaggatattgcttctgttgcatcaacttcgtctgctttggaggtgccaaatggt
gatactggctttgcagacttggacgaaaagatttgggagcggctgtctgagaacttctgt
agttattgctcacaacctttgcccagtttgcactatgaatcacaaaaggaggcagacatt
gctctttgctcagattgcttccatgatgcaagatttgtacctgggcactcaagcttagat
tttcagagagtggatggaatgaaagatggatcagacaatgatggggacagctggactcac
gaggaaactttacagttgctggatggcttagagaagtacaatgataattggaatgctatt
gctgaacatgtcggaacaaagtctaaggcgcaatgtattcaccattttattcgcattcca
gtggaagatggtctgttagagagcattgaagtaccagaagcatccgtttcatctagagta
caaagcaatggcttttcgtattcaaattccaacggtggcatttcaggtagctttcctcaa
agtagccaacctggacaacagcttccatttgttaattctgctaatccagtcatgtcactg
gttgcatttttggcctcagcagtaggaccaagaatagcagcatcctgtgcaaatgcagca
ctatctgttttgacgagagaggattccaggatgtgttcagacggcaatgatgtcacgggt
catgctgctcgtccaaactatgatgcctcatcacctgtctctcccgaaaacgtcaaatac
gctgcaatgtgtggcttgtcagcagcggcaacaaagtgcaaactttttgcagatcaggag
gagcgtgaaattcagagattagcggccaccatcataaatcaccagttaaagagattggag
ttgaagctgaagcaattcgcagaggtggagaccttgcttttgaaggaaagcgagcaggtt
gagagggccaggcagaatcttacagctcagcgcgtccggtttatgtcagctcggtttgct
tccactggaggtcccatgcccggaggcagtagcagcaccatggtatctaatccaatgaat
caagccagccctcgaccaccagcaatgccaggctcaatgcctccggccagcatgcaagcg
ttttacggcaataacatgcaggggcatccagcccagatggctttcttgcagcagcaacag
cggcagcagcagcagatgctctcatttgggccgcgcctgccgctctcagctatccaccct
ggctcatcgtcgtcagcagcacccagcgtcatgttcaacccgggcatgcccagttcggct
acccctaaccatcattccatgctgagaccaccatcctcggggagcaacaattcaagtttt
ggttaa
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