Hordeum vulgare subsp. vulgare (domesticated barley): 123452079
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Entry
123452079 CDS
T11213
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123452079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hvg03009
]
123452079
Ribosome biogenesis [BR:
hvg03009
]
Eukaryotic type
Pre-60S particles
GTPases
123452079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EF-G_D2
EFG_III
GTP_EFTU_D2
NapD
Motif
Other DBs
NCBI-GeneID:
123452079
NCBI-ProteinID:
XP_044984590
UniProt:
F2DYG5
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All DBs
Position
5H:complement(519526825..519530316)
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AA seq
1036 aa
AA seq
DB search
MAAADPRRVRNTCILAHVDHGKTTLADHLVASCGDGLLHPRLAGRLRFMDYLDEEQRRAI
TMKSAAVLLRYGDGPSAHRVNLIDSPGHIDFCSEVSSAARLSDSALILVDAVEGVHIQTH
AALRQAFLERLRPCLVLNKLDRLVTELHLTPAEAYTRLHRILADVNSIYSALRSHSYFSV
LASLEDQPSSSSSASQDDLPDDADDDEEDAFQPQKGNVVFACALDGWGFRIHHFAELYAT
KLGASASALLRGFWGPRYLEKKVDKKGKKNFMIVGKKAVEGTDREPMFVEFILKPLWKLY
EGVLGQDGEIVQKVISNFKLNIPQRELQNKDPKLVLQSVMSRWLPLADAVMAMVVECTPD
PVVAQGARVARLMPKRELATEDAAGCAEVVLEAERVRRCVETCDAAADSPVVVYVSKMFA
VPCKMLPPKGAHGELLTHQDASESEECFMAFARVFSGVLRAGQKIFVLSALYDPLKGDAV
QKHVQEIELQYLYEMLGQGLRPVTSVSAGNVVAIQGLGQHILKSATLSSTKNCWPFSSMM
FQVSPMLRVAIEPANPTDLGALIKGIKLLNRADPFVEYTVSHRGEHILAAAGEVHLERCK
KDLEERFAKVKLVVSDPLVSFKETVEGEGAALLEGLKAPHAFVERTTPNGRCTVRVQVLR
LPNALTKVLQESDQLLGQIMEGKNRNVMLNPQISQDDCDSVAMLRQRMVSAIDSELEAIS
EQVDKEKLQKYRKTWLGYLKRIWSLGPWQVGPNFLLLPDVESSDGVLTMEDGRQGILVRG
RADFSERLGFVSGSDAEANHTPDSSKSSADTPESLHLESVALRNSILSGFQFATNAGPLC
DEPMWGLAFIIEPYIFADNSDAAHQSDQYNIFSGQVITAVKEGCRAAVLQNNPRLVEGMY
FCELTTPTQQLGSTYAVLSKRRAKILKEEMQEGTSVFTVHAYLPVAESIGFSNQLRTLTS
GAASALLVLSHWDAIQEDPFFIPKSQEEIEEFGDGASIGPNLAKKLMNSVRRRKGLHVEE
KVVEHGTKQRTLSKKA
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcggacccccgacgcgtccgcaacacgtgcatcctggcgcacgtcgaccac
gggaagaccacgctggcggaccacctcgtcgcctcctgcggcgacggcctcctccacccc
aggctcgccggccgcctccgcttcatggactacctcgacgaggagcagcgccgggccatc
accatgaagtccgccgccgtgctcctccgctacggcgacggcccctccgcgcaccgggtc
aacctcatcgactccccgggccacatcgacttctgctccgaggtctcctccgccgcgcgc
ctctccgactcggcgctcatcctcgtcgacgccgtcgagggcgtccacatccagacccac
gccgcgctgcgccaggccttcctcgagcgcctccgcccctgcctcgtcctcaacaagctc
gaccgcctcgtcaccgagctccacctcacacccgccgaggcatatacgcgcctgcaccgc
atcctcgcagacgttaactccatctactccgcgctgcggtcgcactcctacttctccgtc
ctcgcgtccctcgaggaccaaccatcctccagctcgtccgcctcacaggatgatctcccg
gacgatgctgatgacgacgaggaggacgccttccagccccaaaagggcaatgtcgtcttc
gcctgcgccctcgatggctggggcttccgcatccaccacttcgctgagttgtacgccacc
aagcttggcgccagcgcctctgctttgctgagaggattttgggggccgcggtacttggaa
aaaaaggtggacaagaagggtaagaagaattttatgattgtgggaaagaaggcggtggag
ggtactgaccgggagcccatgtttgtggagttcattctgaagcccctatggaaattgtat
gagggagtgctggggcaggacggagagatagttcagaaggtcattagcaacttcaaattg
aacattccacagcgggagctgcagaacaaggacccaaagttagttttgcagtcggtgatg
agccggtggctgccgctggcagatgcagtgatggcaatggtggtcgagtgcactcctgac
cctgttgttgctcaaggggccagggttgcaaggcttatgccaaagagggagcttgcaaca
gaggatgctgctggttgcgctgaggttgtcttggaggcagagagggtgagaaggtgtgtg
gagacctgtgacgcggctgcagattcaccggtggtggtgtatgtgtcgaagatgtttgct
gtgccatgtaagatgttaccaccgaagggggcgcatggtgagttgttgacccaccaggat
gcaagtgaatcagaggagtgttttatggcatttgccagagtgttcagtggagttcttcgt
gcagggcagaagatttttgtgctgtcggcattatacgatccactgaaaggggatgcagtg
cagaagcatgtacaggagatcgagctgcaatacttgtatgaaatgctgggacagggcttg
aggccagttaccagtgtgagtgctgggaacgtggttgcaatacagggcctagggcagcat
atattgaagagtgccacattgtcatccaccaagaattgctggcccttctcaagtatgatg
ttccaggtgtctccgatgcttagggttgcaattgagcctgccaacccgacggatctggga
gctcttattaaagggatcaagcttcttaaccgagcagacccatttgttgagtacactgtc
tcgcacaggggtgaacatatccttgccgcagctggggaggttcatctggagcggtgcaag
aaggatctggaggaaaggtttgcaaaggttaagttggtcgtttcggatcccctggtctca
tttaaagagacggtcgaaggagaaggtgctgccttattggaaggcttgaaggctccgcat
gcatttgttgagaggactactccgaacgggagatgcactgtgagagttcaggtcctaaga
cttcccaatgctctgactaaggtcctccaagaaagtgatcaattgcttggtcaaataatg
gagggaaaaaacaggaatgtaatgttaaacccacaaatttctcaagatgattgcgattct
gttgcgatgcttaggcagcgcatggtcagtgccatagacagtgaattggaagccatttct
gagcaagtggataaagaaaaacttcagaagtatagaaagacatggcttggctacctcaaa
aggatctggtccttgggtccttggcaggttggcccaaacttccttctcttgcctgatgtt
gaatcaagtgatggtgtgttaaccatggaagatggaaggcaaggtattcttgtgcgtggt
agagcagatttttctgaaagattggggtttgtgagtggatctgatgctgaagctaaccat
actcctgacagcagtaaatcatcagcagatactcctgaatcattacatctagaatctgtg
gcactaaggaacagcattctttcaggatttcagtttgccacgaacgcagggcctttatgt
gatgaaccaatgtggggtctggcatttatcattgagccttacatatttgctgacaactct
gatgctgcccatcaatctgatcaatacaacatcttcagtggtcaagtaataaccgcagtt
aaagaaggatgccgagcagccgttcttcagaacaacccaaggcttgtcgaaggcatgtat
ttctgtgaattgaccaccccgactcagcaactaggttcaacatatgcagttcttagtaag
aggcgagcgaagattttgaaagaagagatgcaagaagggacttcagtatttacagtgcat
gcttacttgcctgttgccgagagcattggattttctaatcagctcaggaccttaacatca
ggtgcagccagtgcgctgcttgttcttagccactgggatgctattcaggaggaccctttt
tttatcccaaagtcacaggaggagattgaagaatttggagatggggcaagcatagggcca
aacttggctaagaaacttatgaattctgtgaggcggaggaaaggattgcatgttgaagag
aaagttgtggagcatggcacgaaacagcgtactctctctaagaaagcatag
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