Hordeum vulgare subsp. vulgare (domesticated barley): 123452165
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Entry
123452165 CDS
T11213
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00040
Pentose and glucuronate interconversions
hvg01100
Metabolic pathways
Module
hvg_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123452165
Enzymes [BR:
hvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
123452165
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
123452165
NCBI-ProteinID:
XP_044984704
UniProt:
A0A8I6Y7D5
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Position
5H:559611972..559614024
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AA seq
418 aa
AA seq
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MEARPPVLVIAVVVALCGVSLCGVAAAGNVTAAQLFPTSSYDSYHGAPVTYNVKNYGAKG
NGAADDTKALMAAWKVACAAAGTVTLQVPPGTYYMGPTQFHGPCQASSLTFLLQGTLKAA
TDLSRFGNDWIEFGWVKGLIVAGQNGATIDGQGASSWPFNKCPVRKDCKVLPTSVLFVNN
ENTVVKDIASVNSKFFHFALLQNKNTKMLNLRINAPGNSPNTDGIHIERCTGVVIADTKI
STGDDCISIGQGNDNVDIQRVNCGPGHGMSVGSLGRYVGEGDVTRVYVKDMNFDGTMNGL
RIKTWENSPTKSLAAHMVFENMVMKDVENPVIIDQKYCPYYNCEHKYVSGVTIKNITFKN
IKGTSSLPVAVMLRCGVPCQGVVLQDFDIKYKGAGGTSSKCENAKAKYVGYMYPKPCP
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcggccgccggtgttggtcattgccgtcgtcgtcgcgctctgcggcgtgtct
ctctgcggcgtggccgcggccgggaacgtgaccgcggcgcagctgttccccacgtcgtcg
tacgactcgtaccacggcgcgccggtcacctacaacgtcaagaactacggcgctaaaggc
aacggcgccgccgacgacaccaaggcgctaatggcggcgtggaaggtggcgtgcgcggcg
gccggcacggtgacgctgcaggtcccgccggggacgtactacatgggcccgacgcagttc
cacggcccctgccaggcctcctccctcaccttcttgctccagggcacgttgaaggcggcg
acggacctgagccgcttcggcaacgactggatcgagttcgggtgggtgaagggcctcatc
gtcgccggccagaacggcgccaccatcgacggccagggcgcctcctcctggcccttcaac
aagtgccccgtccgaaaggactgcaaggtcctccccaccagcgtgctgttcgtgaacaac
gagaacacggtggtgaaggacatcgcgtcggtgaacagcaagttcttccacttcgcgctg
ctgcagaacaagaacaccaagatgctcaacctgcggatcaacgcgccggggaacagcccc
aacacggacggcatccacatcgagcggtgcacgggggtggtcatcgccgacaccaagatc
agcaccggcgacgactgcatctccatcggccagggcaacgacaacgtcgacatccagcgc
gtcaactgcgggccgggccacggcatgagcgtcggcagcctggggcggtacgtcggggag
ggggacgtgacccgcgtgtacgtcaaggacatgaacttcgacggcaccatgaacgggctg
cggatcaagacctgggagaactcccccaccaagagcctggcggcgcacatggtgttcgag
aacatggtgatgaaggacgtggagaacccggtgatcatcgaccagaagtactgcccatac
tacaactgcgagcacaagtacgtgtccggggtcaccatcaagaacatcaccttcaagaac
atcaagggcacctcctcgttgccggtcgccgtcatgctccgctgcggcgtgccgtgccag
ggcgtcgtgctccaggacttcgacatcaagtacaagggcgccggcggcacatcctccaag
tgcgagaacgccaaggccaagtacgtcggctacatgtaccccaagccgtgcccatag
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