Hordeum vulgare subsp. vulgare (domesticated barley): 123452175
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Entry
123452175 CDS
T11213
Name
(RefSeq) protein transport protein sec23-1
KO
K14006
protein transport protein SEC23
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123452175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123452175
Membrane trafficking [BR:
hvg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
123452175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
VWA
GM130_C
Motif
Other DBs
NCBI-GeneID:
123452175
NCBI-ProteinID:
XP_044984713
UniProt:
A0A287SB70
LinkDB
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Position
5H:524800155..524803811
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AA seq
749 aa
AA seq
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MDFAELEAVEGLRWPWHSWSPTPSAAEALVVPTAVLCTPLHPTAPDLLPILPYPPLRCAS
PSCAAALNPFSRVHHASARWSCSFCGSMANPYPRHISPDSIPAELFPTHSSVEYTLPPDP
AEVDPPAIVFVVDAATAGDELAALKAELLRVVQGLPERVRVALVTFSASVWVHDLGFEGC
ARVVVFNGERELESDKIQQLLGVRHSRYNKLATLKPIEVQRFLLPVSECEFSITSAIEDL
SSLSACPRGHRPLRATGAAISTAIALLEGCCSPNSGGRIIVFTSGPTTVGPGLVVETDLG
KAIRSHRDIFNGNVPLVEKAQDFYKKVAKRLTDSALVLDLLACSLDQIGAAELRYPVEVS
GGLMVLTESFESEQFKSCLRQTFKRDGTDYLNMNFNATIEVVTSREVRICGALGPCISLH
RKNSSVSDKQIGEGGTNYWRMSTLDSKTCIAFFFRADCSRDTDPPTVFFIQFMTRYRHGD
GSNRLRVTTVARRWAGPRSPEIAAGFDQEAAAAVMARLAVHRAETYHVRDVIRWLDKMLI
RFTAKFGNYVPEDPSTFRLSTNFSLYPQFMYYLRRSQFIDVGNSSPDETAFFRLMLNREG
VVGSLIMIQPTLFQYSFDGPPIPVLLDVSSISPDVILLFDSYFYIVIHYGSKIAQWRKLG
YHKDPNHENLRKLLEAPEVDAEALLADRFPVPKLIKCDQHGSQARFLLARLNPSVTQKSQ
LSEGSEVIFTDDVCLQVFIEHLQELAVQG
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgcggagctggaggccgtggagggcctccgctggccgtggcactcgtggtcg
ccgacgccctccgccgcggaggcgctggtcgtccccaccgcggtgctctgcacgccgctc
cacccgacggcgcccgacctgctcccgatcctcccctacccgcccctccgctgcgcctcc
ccgtcctgcgccgctgccctcaaccccttctcccgcgtccaccacgcctccgcccgctgg
tcctgctccttctgcggctccatggccaacccctacccgcgccacatctcccccgactcc
atccccgccgagctcttccccacccactccagcgtcgagtacacgctccccccggacccc
gccgaggtggacccgcccgcaatcgtcttcgtcgtcgacgcggccaccgcgggggacgag
ctcgccgcgcttaaggccgagctgctcagggtcgtgcaggggctgcccgagagggtcagg
gtggcgctcgtcaccttctcggcgtcggtgtgggtgcacgatctcggcttcgaaggctgc
gccagggtggtcgtgttcaacggggagcgggagctcgagtcggataagatacaacaactt
ctaggtgttcgacattcacgatacaacaagttggctacactgaagcctattgaagtgcag
agatttttgttgcctgtttctgaatgtgaattcagcatcacatctgcaatagaggacctg
agttctctgtctgcttgcccacgtgggcaccgcccattaagggccactggcgctgctatt
tccacagctattgctcttctggaaggttgctgctcacctaacagtggtggccgaatcata
gtttttacatctggtccaacgacagtgggtccaggtcttgtggttgaaaccgatcttggg
aaggcaattcgttcacatcgtgacattttcaacggcaatgtgcctcttgttgaaaaagcc
caggatttctataagaaagttgccaagagattgactgacagtgcattagttcttgatctc
ttggcttgctctcttgatcagattggagctgcagagcttaggtatccagttgaagtttct
gggggcttaatggtgcttactgagtcatttgagtctgaacagttcaaaagctgtttaagg
caaaccttcaagcgtgacggtactgattaccttaacatgaactttaatgcaacgattgag
gtagtgacatcaagggaggtcaggatttgtggtgcccttggtccttgcatctcccttcat
agaaaaaacagctcggttagtgataaacaaattggtgagggtggaacaaattattggaga
atgagtacattggacagcaaaacctgtattgctttcttcttccgagctgattgtagccgt
gatactgatcccccaactgtcttctttattcaattcatgacaagataccgacatggtgac
ggtagcaatcgcctaagggtaacgactgttgcgagaagatgggctggacctcgatctcca
gaaattgctgcagggtttgatcaggaagctgcagcagcagttatggccaggcttgctgtt
cacagagcagagacataccatgttagagatgtaatacgatggcttgacaagatgcttatt
cgcttcactgctaagttcggaaactatgtccctgaagatccatctacatttcgcttgtcc
actaatttctccctgtatccgcaattcatgtactacttgcgaaggtcacagttcattgat
gttggcaacagctctcctgatgaaactgctttcttccggttgatgttgaacagggaggga
gttgtgggatctctgatcatgatccagccaactttattccagtactcatttgatggacca
cctatccctgtgctgctagatgtcagctccatctctcctgatgtcattttgctatttgat
tcgtacttctatatagtgattcattatggctcgaagattgctcagtggaggaaacttggc
tatcataaagacccaaatcatgaaaacttacggaagctgcttgaagcgccagaagttgat
gcagaggcactattggcagaccgttttcctgtgccaaaactcataaaatgtgatcagcat
gggagccaggcaagatttttactagcccggttgaatccatccgtgacacaaaaatcacag
ctttctgaaggatctgaagtcatattcaccgacgatgtttgtctgcaagtttttattgaa
cacttgcaggaattggctgttcagggttag
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