Hordeum vulgare subsp. vulgare (domesticated barley): 123452189
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Entry
123452189 CDS
T11213
Name
(RefSeq) heat stress transcription factor A-2a-like isoform X1
KO
K09419
heat shock transcription factor, other eukaryote
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hvg03000
]
123452189
Transcription factors [BR:
hvg03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
123452189
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GFIT
Motif
Pfam:
HSF_DNA-bind
FUSC
APG6_N
Flu_PB2_3rd
HAP1_N
Motif
Other DBs
NCBI-GeneID:
123452189
NCBI-ProteinID:
XP_044984729
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Position
5H:complement(525535951..525568460)
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AA seq
379 aa
AA seq
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MSLFGRFIMDPFHGIVKEEEFDFAGAAADGYSPSSWGSSPSSWGSSQSSWVGGGALAELP
RPMDGLGEAGPTPFLNKTYEVVDDHSTDTIVSWGVAGNSFVVWDAHAFSMVLLPRYFKHS
NFSSFVRQLNTYGFRKVDPDRWEFAAEGFLRGQKELLKTIRRRRPQSSGTPGQQQQQQGG
VCLEVGHFGHDGEVQQLKRDKGTLIAEVVKLRQEQQATRVQMQAMEARLAATEQKQQQMT
VFLARAMKSPSFLQMLVERQDQSRRKELADALLSKKRGRPIEYLLPRNGETCYSAAAQGY
GHGLVDGGEGRRADGEDTESFWKELLSLGLEERQREAGGGGGGEASGAEVDDDVDDEVDE
LVQSLYHLSPNRPHGQHHQ
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtttggtcgtttcatcatggatccctttcacggcattgtgaaagaggaggaa
ttcgacttcgccggagctgcggcggatggatactcgccgtcttcgtggggctcatcccct
agttcctggggctcttcccaatcttcgtgggtcggcggcggcgccttggcggagctgccg
cggccgatggacggcctcggcgaagccggtcccaccccgttcctgaacaagacgtacgag
gtggtggacgaccacagcacggacaccatcgtgtcgtggggggtcgccgggaacagcttc
gtggtgtgggacgcccacgccttctccatggtgctcctcccgcgctacttcaagcacagc
aacttctccagcttcgtgcgccagctcaacacctacgggttcaggaaggttgatccggac
aggtgggagttcgcggcggaggggttcttgcggggccagaaggagctcctgaagacgatc
aggcggcgccggcctcagtcgtcgggcacgccggggcagcagcagcaacaacaaggaggg
gtgtgcctggaggtggggcatttcggtcacgacggcgaggtgcagcagctgaagcgcgac
aagggcaccctgatcgctgaggtggtgaagctgcggcaggagcagcaggcgacgcgcgtg
cagatgcaggccatggaggcgcgcctcgccgccacggagcagaagcagcagcagatgacg
gtgttcctggcgcgcgccatgaagagcccgagcttcctccagatgctggtggagcggcag
gaccagagccggcggaaggagctggcggacgcgctcctctccaagaagcgcggccgcccc
atcgagtacctcctcccccgcaacggcgagacctgctacagcgccgcggcccaaggctac
ggccacgggcttgtcgacggaggcgagggcaggcgcgcggacggcgaggacacggagagc
ttctggaaggagctgctgagcctgggcctcgaggagaggcagagggaggcgggcgggggc
ggcggaggggaggcgagcggcgccgaggtggacgacgacgtggacgatgaggtggacgag
ctggtgcagagcctctaccacctcagcccgaaccggccccacggccaacaccaccagtga
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