Hordeum vulgare subsp. vulgare (domesticated barley): 123452347
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Entry
123452347 CDS
T11213
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hvg03036
]
123452347
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hvg00535
]
123452347
Chromosome and associated proteins [BR:
hvg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
123452347
Meiosis-specific proteins
Cohesin complex and associated proteins
123452347
Proteoglycans [BR:
hvg00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
123452347
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
MscS_porin
AAA_29
Motif
Other DBs
NCBI-GeneID:
123452347
NCBI-ProteinID:
XP_044984926
UniProt:
A0A8I7B1R8
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Position
1H:complement(511829463..511842823)
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AA seq
1204 aa
AA seq
DB search
MYIKKVIIEGFKSYREETSTEPFSPKVNVVVGANGSGKSNFFHAIRFVLSDMFQNLRSED
RGALLHEGAGHSVVSAFVEIIFDNSDNRIPVDKEEVRLRRTVASKKDEYYLDGKHVSKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEDRRRESLKIMQ
ETANKRKQIDQVVRYLEERLRELDEEKEELKKYQQLDKQRRSLEYTILDHELNDARNELA
SMDDNRRQISERMSQADNEVVELREKVKSLEKEIKASTKGINETKSEKEDAEKKRTEALK
VVSQIDLDLRDLKDRISSEKRAKDEAVRELNSMRKESEKSKSELAQISKVHAAKLKEEED
ISKSIMDREKRLSILYQKQGRATQFKNEAARDEWLRKEIHDLERVLLSNRKQESLLQDES
QKLKDEINKLTDHIESRRSESSKLESALADKQKHHNDFTKQKNALQDERKSFWKEENSVT
AEIDRLKEDLVKAQKSLDHATPGDIRRGLNSVSRIIRDHGIGGVFGPVLELVDCEEKFFT
AVEVTAGNSLFHVVVENDDISTRIIQVLTREKGGRVTFIPLNRVHAPNVNVPQSSDFVPL
LKKLKFRAEHRRAFEQVFGRTVICRDLETATRVARSNSLDCITLDGDQVAKKGGMTGGFY
DSRRSRLKFVKVIRDNKAEIEKKTAHLENVGKKLKDIDKKITDLITKHQQMDAERDHAKS
ELEQFKADIASATKQKGSLEKALAKKEKSLANIRNQIEQIQSGIAMKNDEMGTELIDQLT
LEERDLLSRLNPEITGLKEKFLSCKNSRIEIETRKEELENNLSTNLMRRQKELEAIISSA
DSKTLPVEVEAKEQELKESKRTLDEATTVLKANVDAINAHTRQMDQLKKQRDDLKALEAN
LEQTVQDGAKDLEQLMSNRSTYLVKQDECMKKIRDLGSLPADAFETYKRKNKKQLQKLLY
DCNEQLKQFSHVNQKALDQYVNFTEQREQLQRRRAELDAGDEKIRELISVLDQRKDESIE
RTFKGVARHFREVFSELVQGGHGYLVMMKKKDGDAGDDDMDEDAPREPDPEGRIEKYIGV
KVKVSFTGKGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GSVVRRLADMADTQFIATTFRPEILKVADKIYGVTHKNRVSFINVVSKEQAMDFIEHDQT
HNAS
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaagaaggttataatcgaagggtttaaaagctacagggaggagacctcgaca
gaacctttcagccccaaagttaacgtagtcgttggtgcaaatggatctggcaaatcaaac
tttttccatgctatacgctttgtcctgagtgacatgtttcagaacctgcgcagcgaggac
aggggagctcttctccatgaaggtgctggacactcagttgtatctgcttttgtcgagata
atttttgataattcagacaaccgtattccagttgataaagaagaggtacgcttgcgaagg
acagttgcttcaaagaaggatgaatactacttggatggaaaacatgtcagtaaaactgaa
gtcatgaatctgctggagagcgctggtttctctcgatctaatccatactatgttgtccag
caaggaaagattgcatcccttactctaatgaaagattctgaacgactggatcttctcaaa
gagattggtggtacacgtgtttatgaagatagacgtcgggaaagcttgaaaataatgcaa
gaaacagccaataaaaggaagcagattgatcaagttgtccgctacctggaggagagactg
agagaacttgatgaagagaaggaggaactaaagaagtaccagcagctggacaaacagaga
agatcacttgagtatactatattggaccatgaactaaatgatgctagaaatgaattagct
tcgatggatgataatcgaagacaaatttctgaaaggatgtcacaagcggacaatgaagtg
gtagagttacgtgagaaggtcaaaagtttggagaaagaaataaaagcctctactaaaggg
ataaatgaaaccaagtctgaaaaggaagatgcagagaagaagcgtactgaagcactaaag
gtagtttctcagattgatcttgatctgagagatttaaaagacagaatttcaagtgaaaaa
cgagcaaaggatgaagccgtaagggaattaaatagtatgaggaaagaaagtgaaaagtca
aagtctgaattggctcaaattagtaaggtgcacgcggccaaattgaaggaagaggaagat
atatcgaaaagtataatggaccgagagaagcggctgagtatattgtaccaaaagcagggg
agggcaactcaatttaagaatgaggctgccagagatgagtggcttcggaaagaaattcat
gatcttgagcgtgtacttttatcaaatagaaagcaggaaagcttacttcaagatgaaagt
cagaagcttaaagacgaaattaataagttgacagaccacattgaatctcgcagaagtgaa
tcaagcaagttagagtctgctcttgcagacaagcaaaagcatcacaatgacttcacgaag
cagaaaaatgcacttcaagatgaaaggaaatcattttggaaggaggaaaatagtgtgaca
gctgaaatcgataggctaaaggaagatcttgtgaaggcacaaaagagtttggaccatgca
acgcctggggatatcaggagaggcctgaattctgttagcagaatcatcagggaccatggt
attggaggagtttttggtccagtgttagaactggttgactgcgaagagaagttttttaca
gctgttgaggtcactgctgggaatagcttgttccatgtggtggttgaaaatgacgatata
tcgacaaggataattcaggtattgactcgagaaaaaggtggacgggtgactttcatacca
ctgaatagagtgcacgctccgaacgtcaatgttccacagagctctgattttgttccattg
ttaaagaagttaaagtttcgtgctgagcatcgtcgcgcttttgaacaggtttttggtagg
acagttatatgccgagacctggaaactgcgaccagagttgcacgcagcaatagtctagat
tgcatcacacttgatggtgatcaagtagcgaaaaagggtggcatgacaggaggtttctat
gattccagacgctcaagactgaagtttgtaaaagtaatcagggacaacaaagcagaaatc
gaaaaaaagacggcacatctagagaacgtgggaaaaaagttgaaagatatagataagaaa
attacagatttgattaccaaacatcagcaaatggacgctgaacgtgatcatgccaagtcg
gagttggaacagtttaaagctgatattgccagtgcaacgaagcaaaagggatcactggag
aaagcccttgcaaagaaggaaaaatcactcgcgaacatccgcaaccaaattgagcaaatc
caatctggcattgcaatgaaaaatgatgagatgggcacagaactgattgaccagctaact
ttagaagaaagagatctcctttcgcgactgaatcctgaaattactggattgaaggagaag
ttcctctcgtgtaaaaacagtcgcattgagattgaaacaagaaaggaagaactggagaac
aatttgtcaactaatcttatgaggcgtcagaaagagttggaagcaataatttcatctgca
gattctaaaaccttgcctgttgaagtcgaagcaaaagagcaagaattgaaagagtctaag
aggactcttgatgaggcgacaacagtactgaaagctaatgtcgatgctattaatgcacat
acaagacagatggaccaactgaaaaaacaaagggatgatctgaaggctcttgaagctaat
ttggagcagacggtgcaagatggggcaaaagacttggaacagttgatgagcaataggagt
acgtatcttgtcaaacaagatgagtgtatgaagaaaatccgtgatctgggctcattgcct
gctgatgctttcgaaacgtacaagagaaaaaacaagaagcagctacagaagctactctat
gactgcaatgagcagttgaagcaatttagtcatgtcaaccaaaaggctcttgaccaatat
gtgaacttcactgaacagcgcgaacaacttcagagaagacgggctgaacttgatgctggt
gacgagaaaattagagagttgatatcagttttagaccaaaggaaggatgaatcaattgag
cgcacatttaaaggagttgcaaggcacttccgcgaagtgttctctgaattagtgcaaggt
ggccacggatacttggttatgatgaagaaaaaggatggtgatgctggcgatgatgacatg
gatgaggatgcgcctcgtgaaccagatcctgaagggaggatagagaagtatattggtgtg
aaagtcaaggtttccttcactggcaagggagaaactcagtccatgaagcagttgtctgga
gggcagaagacagtggtggccttaacactgatctttgctatccaacgatgtgacccagct
ccgttctacctctttgatgagattgatgctgctctggatcctcagtacagaacggctgtc
gggagcgtggttcgacgtctggctgacatggcggacacccagttcatagccaccacattc
aggccggagatcctgaaggtcgcggacaagatctatggcgtgacgcacaagaacagggtg
agcttcatcaacgtggtgtccaaggagcaggccatggacttcatcgagcacgaccagacg
cacaacgccagctga
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integrated database retrieval system
