Hordeum vulgare subsp. vulgare (domesticated barley): 123452531
Help
Entry
123452531 CDS
T11213
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hvg03036
]
123452531
Chromosome and associated proteins [BR:
hvg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
123452531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mcl1_mid
WD40_WDHD1_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Ctf4_C
eIF2A
WD40_Gbeta
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Tricorn_2nd
Beta-prop_WDR36-Utp21_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
WD_LRWD1
Beta-prop_HPS5
Beta-prop_ELP1_1st
Beta-prop_SPT8
RMC1_N
SGL
Motif
Other DBs
NCBI-GeneID:
123452531
NCBI-ProteinID:
XP_044985127
UniProt:
A0A8I6XR82
LinkDB
All DBs
Position
5H:complement(362221796..362227612)
Genome browser
AA seq
1010 aa
AA seq
DB search
MKGRAVKLREAHKAGSGSPAFCSVAWSPGGQHVVTASAADVAILIHDAAAGTGARGSGSA
AAVATIRLHKDGVTAVALAPGSGGSLASGSIDHSVKFYSFPDGTFQSNVARFTLPIRSLA
FNKKGALLAAAGDDDGIKLIATVDNTISKVLKGHKGSVTGLAFDPKNDYLASIDSFGTVI
FWDLCLGSEARSLSCVAPTFGSDHSVKNTLCWSPDGHTLAVPGLRNNVVMYDRDTAEEVF
TLKGEHEQPICSLCWSPNGRYLATAGLDRQVLVWDVKSRQDIERQKFDERICSMAWKPED
NAIVLIDVMGKFGIWESVVPSTMKSPIEGAPELNPPRVPLFDDEDEEEKPSTSAGFDDEV
DESLGDSAPFNHKRLRRKATFDDHMNRDSEDEDMIHEMQPVKRTKGRHKDDKEGAKKAMD
DSATSGRLVTARMQAAFQSGSTPSHPGKRNFLAYNMLGSITTIENEGHSHVEVDFHDTGR
GPRVPSMTDYFGFTMAALNESGSVFANPCKGDNNMSTLMYRPFSSWAGNSEWSMRFEGEE
VKSVTLGAGWVAAVTSLNLLRIFTEGGLQMHILSVSGPVVTVAGHGDQLAIVTHASDCLP
SGDQVLDVKVFNITEGAQSASGRLVLTPSSHLAWFGFSENGQLSSYDSKGILRVFSGQFG
GSWLPVFSSTKARKSEDESHWVVGLDANNIFCILCKSPESHPQVMPKPVLTILELSFPLA
SSDLGANSLENEFMTRKLHLSQIQKKIEEIAALGLDTAAFEDEAFNTEAALDRCILRLIS
TCCNGDKLVRATELAKLLTLEKSMKGALTLVTRLKLPILQEKFSSLLEERMLNDARMTGT
AGVCSNPASTNYSPALNKIQPAKIVQNGNNLEASTPNPSARRSSAAGSKKAELEQPKNMK
ENTAKLSPAVTPSAKIPKKTDTSEGKAKRERDGTAGVSTAEQILKGGIDQAGAKNKSSED
GSRGEPQRPLNPFAKSSSNKEQSSSLLDSIKKMKVESEKVDKANSKKVKV
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggccgcgcggttaagcttcgggaggcgcacaaggcgggctcgggctccccggcc
ttctgttcagtcgcctggtcccccgggggacagcacgtcgtcaccgcgtccgccgccgac
gtcgccatcctgatccacgacgccgccgcggggaccggggcccgtggctctggttcagcc
gcggccgtcgccacgatccggctccacaaggacggcgtgacggccgtcgccctcgcgccg
ggctccggcggctcgctcgcgtccggttccatcgaccactcggtcaagttctactccttc
ccagacggcacgttccagagcaacgttgcccggttcaccctcccaatccgctcgctggcg
ttcaacaagaagggcgcccttttggccgccgccggcgacgatgacggcatcaagctgatt
gctacagtcgacaacacgatctccaaggtgctcaaaggccacaagggctccgtgaccggg
ctggcttttgaccccaaaaatgattatctggcatcaatcgacagctttggcactgtcatc
ttttgggatctttgtttgggcagcgaggcacgcagcttgtcgtgtgttgccccgacattc
ggttccgaccactcggtgaagaataccctgtgctggagtcccgatgggcacacccttgct
gttcctgggctgaggaacaatgtggtcatgtatgacagggacaccgcggaggaggtattc
acattgaaaggagaacatgagcagccaatatgcagcctttgctggtccccgaatgggagg
tacctggcaactgctggcctcgacaggcaggtgcttgtgtgggatgtgaagtcaaggcag
gacatcgagaggcagaagtttgatgaaaggatatgtagcatggcatggaaaccggaggat
aatgctatagtactcattgatgtaatgggcaaatttgggatttgggaatcagtggtccct
tcgactatgaagtcgcccattgagggtgcgcctgagctaaacccgccaagggttcctttg
tttgatgacgaagatgaggaagaaaagccaagcacatcggctggttttgatgatgaggtc
gatgaaagccttggtgattcagcacctttcaaccacaagcggttgaggagaaaggccaca
tttgatgaccacatgaatagagatagcgaagatgaggacatgatacatgagatgcagcca
gtgaagagaacaaaaggtaggcacaaagatgacaaagagggtgctaagaaggcaatggat
gattcagcaacttccggaaggttggttacagcaagaatgcaagctgccttccaatccggg
tcaacaccatctcatcctggcaagcgaaatttccttgcttacaacatgcttggaagtatt
accaccattgaaaatgaggggcactcgcatgtagaggtcgacttccacgacacaggaaga
ggccccagagtcccttccatgacggactattttggtttcaccatggctgcactgaatgaa
tcaggaagcgtgtttgcaaatccatgcaagggcgacaacaatatgagcactcttatgtat
cgccccttcagcagctgggctggtaacagtgagtggtcaatgaggtttgagggagaagaa
gtgaagtctgtgactcttggtgctggatgggttgctgcagtcacaagtttaaatcttttg
cgcatcttcaccgaagggggcttgcagatgcatatcctctcagtcagtggtccagtggtt
accgtggcaggtcatggggatcagctagcaattgtcacacatgcttcagattgcctaccc
tcgggagatcaggtcctagatgttaaggtattcaacataactgagggggcacaatctgcg
tctggtcgccttgtcttgactccatcctctcatctagcttggtttggtttcagtgagaat
ggccaacttagttcatatgactccaagggaatactgagggtcttttctggtcagtttggt
gggagttggcttcctgtgttcagttcaaccaaggcaagaaaatctgaagatgaaagccac
tgggtggtgggtttagatgctaataatatattctgcattctatgcaaatcccctgaaagt
catcctcaggtgatgcccaagcctgttctaactatacttgagctgtcatttcctcttgct
tcatctgacctcggagccaatagtttggaaaacgagttcatgacaaggaagttgcatctc
tcacagatccaaaagaaaatagaagaaattgctgctctgggtctggacacagctgcattt
gaagatgaagcattcaatacagaggctgcacttgaccggtgcatcctgagactaatatct
acttgttgcaatggtgataagctagtccgagccactgagcttgcaaagttactgacgttg
gagaaatcaatgaagggagcattaacacttgttacacgcttgaaacttcctatattacaa
gagaagttcagttcattacttgaggagagaatgttaaacgacgcaagaatgactggaaca
gctggtgtttgctcgaacccggccagtacaaactactcaccagcgctcaataaaatccaa
cctgctaaaattgtgcaaaatggaaataacttggaggcatccacaccaaacccttctgcc
cgacgaagcagtgcagctggatctaagaaggcagaattagaacagccaaaaaatatgaag
gaaaacactgcaaagctttcacccgcggtcaccccttcagccaagatacccaagaagacc
gatacctctgaagggaaagcaaagagggagagggatggaacagcgggcgtgagtacagct
gaacagattctgaaaggaggcattgatcaggctggtgctaaaaataagagcagtgaagac
ggcagccgaggagagcctcaacggccacttaacccatttgcaaaatcttcatccaacaaa
gaacagtcatcatcgcttttggattccataaaaaagatgaaggttgaaagcgagaaagtt
gataaagccaacagcaagaaggtgaaagtataa
DBGET
integrated database retrieval system
