KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123452563
Entry
123452563         CDS       T11213                                 
Name
(RefSeq) zinc finger CCCH domain-containing protein 16 isoform X1
  KO
K24273  U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hvg03041]
    123452563
Spliceosome [BR:hvg03041]
 Complex A
  U2 snRNP components
   U2 related factors
    123452563
 Complex B
    123452563
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf-CCCH_4
Other DBs
NCBI-GeneID: 123452563
NCBI-ProteinID: XP_044985167
UniProt: A0A8I6Y2J8
LinkDB
Position
5H:541273033..541280309
AA seq 752 aa
MSTAAADLPAASTRSERRKERKKQRRRRARREAAAAARAAAEALAADPEEGRRLRELEEA
EADASDRARRAFEDAERRWLEKAASRAAEEAAAEEEACAAEASTRDKYNDDHRDETEEDG
EWEYVEDGPAEIIWQGNEIIVKKKKVKIPKKAEAKPLSQEEERPTSNPLPPQSVAVDSQR
REPSLSARELLEKVAQETPNFGTEQDKAHCPFYLKTAACRFGVRCSRVHFYPDKSCTLLM
KNMYNGPGLVLEQDEGLEFTDEEIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSFHLRG
NVYVHYKALDSALLAYNSMNGRYFAGKQITCEFVALTKWKSAICGEYMRSRFKTCSHGVA
CNFIHCFRNPGGDYEWADWDNPPPKYWTRKMAALFGPSDDAVFDKASDAPDFERLHSSDR
KRLRSSDGRYISSRHRDGDAHKRHSSRVFSHSKQEQSNYIMKYGHTRHSREPSTAKKQRG
HEIEDDIGRYCSPVENERVSQTHKREEKHRDGHGDGARGDNGKIKSRKHRSEQHESLESG
CSDWPSEFADAGTSRSPSCSKSTNRYSNHNRSRGQSLDDSNLERGYSTADKSSGKAHIAK
SSSRHYVEDDSYGEKGSGRDKSGKHSDHCDDPDDRWLATTSDVDSDGETQFLRSSSGIGK
GGKNDNAPRDEDDRCQRSSSRSARSRANETKSSRKRKKHHSEIRKNSDSDDSPSDSSDIR
DSSSHAWRSRSRSSEEDLSLHRRRKGRLGHDS
NT seq 2259 nt   +upstreamnt  +downstreamnt
atgtccacggcggccgctgatctcccggcggcgtctacgaggagcgagaggcggaaggag
cggaagaagcagcgccgccggcgcgcgcgtagggaggcggcggcggccgcgcgggctgcg
gcagaggcgctcgccgccgacccagaggaggggcgccgcctccgagagctcgaggaggcc
gaggccgacgcgtccgaccgcgcccgccgcgcctttgaggacgccgagcgccgatggctc
gagaaggccgcctcgcgtgccgccgaggaggcggctgcggaagaagaggcgtgtgccgcc
gaagcttccacgcgcgataagtataacgatgaccaccgagacgagacagaagaagatggg
gagtgggagtatgttgaagatggaccagcagagatcatatggcaaggaaatgagatcatt
gtgaagaagaaaaaggtcaaaataccaaagaaggcagaggctaaaccactaagtcaagag
gaagagagacctacatcaaatccgctgccacctcagtctgtagctgttgattctcagagg
agagaaccttccttgtctgctcgagaactacttgagaaagttgctcaagagactccaaat
ttcggaactgaacaggataaggcccattgcccattttacctcaaaacagcagcttgccgc
tttggagtgcgctgcagcagagttcacttctaccctgacaaatcatgcacattgctcatg
aaaaacatgtataatggtccgggccttgttttggaacaagatgaagggcttgagtttaca
gacgaagagattgaacagagctatgaagaattttatgaagacgtgcacacagaatttctg
aaatttggtgaacttgtcaacttcaaggtatgtagaaatggatcgttccatcttcgagga
aatgtctatgtgcattataaagctttggattcagctcttcttgcctacaacagcatgaat
ggtcgatattttgctgggaagcagataacatgcgagtttgttgctctgacgaaatggaag
tctgcgatctgtggtgagtacatgaggtcaagattcaagacatgttcacatggagttgct
tgtaatttcattcattgctttcgtaatcctggtggagattatgagtgggctgattgggac
aatcctccacctaaatactggactcggaagatggctgctctgtttggaccctcagatgat
gctgtttttgacaaggcgagtgatgccccagatttcgaacggttacacagttcagacagg
aagagactgagaagttctgatggcaggtatatttcaagtagacatagggatggagatgca
cataaacggcactcatcaagagttttttcacattcgaagcaagaacagagcaattatatc
atgaaatatgggcatactcgacatagtagagaaccatctacagcaaaaaagcaacgaggc
catgagattgaagatgatattggcagatactgttcgcccgtggaaaatgaaagagtgtcc
caaacacacaagcgtgaagagaaacatagagatggccatggcgatggagcacgtggagac
aatggtaaaatcaagtccaggaagcacagatctgaacagcacgaaagtctggagtctgga
tgttctgattggccttcagaatttgctgatgcaggcacgagcagaagtccttcatgcagc
aagtccaccaacaggtacagtaatcacaataggagtcgggggcaatccttggatgattcc
aatcttgaaaggggctactccactgcggacaaatcatcagggaaagcgcacattgccaaa
agtagctcgagacattacgtagaagatgactcttatggtgagaaaggtagtggaagagac
aaatctggaaagcacagtgatcattgtgatgaccctgatgatagatggctagcaacaact
agtgacgttgattcagatggagaaactcaattcctgagatcaagcagtggaattggtaaa
ggtggaaagaatgataatgctcctcgagacgaggatgatcgttgtcaaaggtccagcagt
aggtctgctaggtcaagagcgaacgagacgaagagcagtaggaagaggaagaagcatcac
agtgaaatcaggaagaatagcgatagtgatgacagtccgtcagactctagtgacattagg
gattcgagctcacatgcatggaggagtcgatcaagaagcagtgaggaagatctctcttta
cacagacggaggaagggtcgcctaggtcatgattcgtga

DBGET integrated database retrieval system