Hordeum vulgare subsp. vulgare (domesticated barley): 123452593
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Entry
123452593 CDS
T11213
Name
(RefSeq) protein transport protein Sec61 subunit alpha-like
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03060
Protein export
hvg04141
Protein processing in endoplasmic reticulum
hvg04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
123452593
04141 Protein processing in endoplasmic reticulum
123452593
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
123452593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123452593
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hvg02044
]
123452593
Membrane trafficking [BR:
hvg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
123452593
Secretion system [BR:
hvg02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
123452593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Plug_translocon
Motif
Other DBs
NCBI-GeneID:
123452593
NCBI-ProteinID:
XP_044985207
UniProt:
F2CT03
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Position
5H:397161653..397165541
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AA seq
475 aa
AA seq
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MAGGFRVLHLVRPFLAFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG
ADPFYWMRVILASNRGTVMELGITPIVTSGMVMQLLVGSKIIEVDNSVREDRALLNGAQK
LLGILIAIGEAVAYVLSGMYGSVSQLGTGNAILIILQLFFAGIIVICLDELLQKGYGLGS
GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRSDKVRALREAFYRQ
NLPNVTNLLATVLVFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILHSAL
ITNLYFISQLLYRKYSGNFLVNLLGIWKESEYSGHSIPVGGLAYYVTAPSSMADILANPF
HALFYVVFMLSACALFSKTWIEVSGSSAKDVAKQLKEQQMVMPGHRESNLQKELNRYIPT
AAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGFFGF
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggctggcggctttcgggtgctgcatctggtcaggcctttcttggctttcttgccggaa
gtgcagagtgctgataggaaaataccatttagagaaaaagtgatctacaccgtcatttct
ctcttcattttcctcgtgtgcagtcagctcccgctctatggcatccattcgaccactgga
gctgatcctttctactggatgcgtgttattcttgcatcaaaccgtggtactgtcatggag
ctgggtattaccccaattgtgacatctggaatggttatgcaacttctagtgggatccaag
attattgaagtggacaacagtgtgagagaggatcgtgctctgctgaatggtgcacaaaag
ttgctgggtatcctgattgccattggggaagctgtggcatatgttctgtctggaatgtat
ggcagtgtgagccaacttggaactggaaatgctattctcatcatacttcagcttttcttt
gctggcatcattgtcatctgtctagatgaacttctccagaaaggctatggtttgggttct
ggcatttctctcttcattgctaccaatatctgtgagaacatcatctggaaggcatttagc
cccaccaccatcaacagtggacgtggtgctgagtttgaaggggctgtcattgcattgttc
catctgttgattactcgatcagacaaagtccgtgccctacgagaggctttctaccgtcag
aatctgccaaatgtgaccaatttacttgctactgtgttggtctttctcatagttatctat
ttccaaggcttccgtgttgtgctcccagtgaggtcaaagaatgctcgtgggcagcaaggc
tcgtacccaattaagctgttctacacttcaaacatgcccatcattctgcactctgccctg
attaccaacctgtatttcatatcccagcttctctacaggaagtacagtggcaattttctg
gttaaccttctcggtatatggaaagaatctgaatattctggccattctatccctgttggt
ggtcttgcttactatgtaactgcaccatcaagtatggctgatattctggcgaatccgttc
catgcattgttctatgtggtcttcatgctgtcagcatgtgctctcttctcaaaaacatgg
attgaagtctctggttcatcagccaaggatgtcgctaagcagctgaaggaacaacaaatg
gttatgccaggccatcgcgagtcaaacttgcagaaggaactgaacagatacatccctact
gctgctgcatttggtggagtatgcatcggtgcattgactgttctggctgatttcatgggc
gcaattggttcaggaaccggtattctgttggctgttaccatcatataccagtactttgag
accttcgagaaggagagggcgaccgagcttggtttctttgggttctga
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