Hordeum vulgare subsp. vulgare (domesticated barley): 123452594
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Entry
123452594 CDS
T11213
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123452594
Membrane trafficking [BR:
hvg04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
123452594
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_C
Ig_TPPC8_2nd
Ig_TRAPPC9-Trs120_1st
Motif
Other DBs
NCBI-GeneID:
123452594
NCBI-ProteinID:
XP_044985208
UniProt:
A0A8I6XX43
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Position
5H:542561444..542575645
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AA seq
1274 aa
AA seq
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MDPLRSYLGRILLEDVTPVVMVLTTPLAEAACRKSGLSFVDMLSPFSLFKKIDVPVRTAS
DQPYRLQQFKIRMVYASDVRKQDCEVADARIKQVVSEANENALPDLLSDPPQLEDVLKKP
EAELCPLWIKRFNRELVRTLSFSDHETFDHPVACLLVVSSKDKEPISKFADLFNANQLPP
LLNEGIMDPQILKHYLLLHEQQDGPQEIAVNILAEMRTTLGLNDCKLLSINSSTQADGSD
ADNSWSTYKAHGLHNHEGTCFLNMDDMNEIKDFMQDFASNHIIPYMEQKIRVLNQQVATT
RKGFRNQIKNLWWRKRDDVPEAANGPVYTFTSIESQIRVLSDYAFMLRDYELALSNYRLL
STDYKLDKAWKRFAGVQEMSGLCYFMLDQSRKDAEYCMENAFTTYLRIGSSGQRNATRCG
LWWAEMLKTRGQHREASTVYFRISNEEPSLHSAVLLEQAACCYLLSSPRMLRKYGFHLIL
AGNSYYLSDQKQHAVRAYRNALFVYKQNPWSYINNHVHFNVGRWYGVLGIFDVAIKHLLE
VIACSHQSLTTQSMFLNDFFHFVQSTGEKFDVYKLQLPVFNMSSLRVVNEDHRTYASNAD
VDVNESIWQELEEELIPSSSVVRTNWLDTQPKSSPFRNNKACVCVAGEAVKLNVELKNPL
QISVNVSGISLICQLSTNLNASGAETGALTTAAEEDIATTKPSISTFESDGNNFTLSKLD
IVLGGGETKRIQLEVTPKVVGILKLVGIRWTLSDSVVGYQYFEVATQKKNKKGKRGARRS
LNNNLIVIKGLPKLTGYIECLPTKAFTGDLQLLTLNLRNQSEHAVKNIKMKISHPRFVIP
GDSSDLDLEFPQCLRKHVQSDSNTVSEGTKENVKGSLFAFPQDIKIQGGATFSWPIWFHA
ATPGNFSLYLSLYYEMESTTDIPYRTLRMHYNVEILPSLDVSFAISMCSSGLQEYIVRMD
VINKTPSDSFALHQLSCVGTKWAVSTLPSRDSISFVETVPSNQAVSCFFKIKDLSTSSCI
EAADGSCGSDIVLSPGDSTDVFDVSRTPITDFHYQERHQQGKLAKVPRSLLDFILISKAV
AVSSSKSEQLLSHHTCHCSALIQNPVWWLMEGPRTITHDFSKSCCEANIELVIHNSSEHN
TTVRVVTSDCMAEKSQTAPSHEFASGQGGWYDVSLENDIKAIASTKGAHSEKQSSESISP
FVWCSLSSAQVDLKPDSSAKIPLKVCIFAPGTYDFSTYELHWQVHSSESGQVDENVTSGG
GQGYPFYVNVLQGA
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggatccgctccggagctacctggggcggatcctcctcgaggacgtcaccccggtggtg
atggtgctgaccaccccgctcgccgaagccgcgtgccgcaagagtggcctcagcttcgtc
gacatgctctccccgttctccctcttcaaaaaaatcgacgtccccgttcgcacagcgagt
gaccagccttacaggctccaacagtttaagattcggatggtgtacgcgtcggatgtccgg
aagcaggactgcgaggttgcggatgcgagaattaagcaggtcgtttctgaggccaacgag
aacgctcttccggatttgctttcagacccgccacagttggaagatgtactcaaaaagcct
gaagctgagttgtgcccattatggattaagaggttcaacagagagctagtgcggacactg
tccttttcagaccatgaaacatttgaccaccccgtggcatgtcttttagttgtatcgtca
aaggacaaagagccaatcagcaaattcgctgatcttttcaacgcaaatcagttgcctcct
cttttaaatgaaggcataatggatccccaaattctgaagcactatcttttacttcatgaa
caacaagatggaccacaagagatagctgtgaacatcttagcggaaatgaggaccacccta
ggcttgaatgattgtaaattgctgagtattaactcttctacacaagcggatggtagtgat
gctgataattcgtggtcaacctataaagctcatggcctgcacaatcatgaaggaacttgt
ttccttaacatggatgatatgaacgagataaaggattttatgcaagattttgcttctaat
catatcattccctacatggagcaaaagatccgtgtgctcaatcagcaggtagccacgaca
agaaagggctttagaaatcagataaagaacttgtggtggagaaagagagatgatgtccca
gaagctgcaaatggcccagtgtatacattcacctccatagagtcgcagatcagagttctc
agtgactatgctttcatgttgagagactacgagcttgctttgtccaattacagattactt
tcgacagattataagcttgataaagcttggaagcgttttgctggtgttcaggagatgagt
ggactttgctatttcatgttagatcagtcaaggaaggatgctgaatattgcatggaaaat
gcattcactacgtatttgagaattggatcttctggtcagagaaatgctactagatgtggc
ctttggtgggcagaaatgcttaaaacacgaggacagcatagggaagcatcaactgtttat
ttccgcatatcaaatgaggaaccttccttgcattctgctgtgctgcttgagcaagctgct
tgttgctatttgttgtcaagtccacgtatgcttcggaagtatggatttcacctaatatta
gctggcaatagttactacttgtctgatcagaaacaacatgctgttcgtgcatacagaaac
gctctgtttgtctacaaacaaaatccttggagttacatcaacaatcatgtacattttaat
gttgggaggtggtatggagtccttgggatattcgatgtagctatcaagcacttgctggag
gttattgcttgtagccatcagtcgctgacaacgcaaagcatgttcctcaatgattttttc
cattttgttcagagtacaggggaaaagtttgatgtatacaagcttcaacttcccgttttc
aacatgtcatcactcagagttgtaaatgaagatcatcgcacttacgcatcaaatgcagat
gttgatgttaatgaaagcatttggcaggagctggaagaagaattgatcccatcatcatct
gttgttagaactaactggctcgacactcagccaaaatcttctccctttagaaataacaag
gcatgtgtttgtgttgctggagaggcagtcaaactgaacgttgagctgaagaatccttta
caaatttccgtcaatgtgtctggcatctcccttatatgccagctttccaccaatttgaac
gcttcaggtgcagagactggtgcattaacaacagctgctgaagaagatatagctaccacg
aagccctctatttcaacatttgaaagtgatggaaacaatttcacattatcgaagcttgac
attgtattaggaggaggtgaaaccaaaagaatacaacttgaagtgactccaaaagttgta
ggtattctgaagttagttgggataaggtggaccctgtcagattcagtagtaggctatcag
tacttcgaagtggctacacaaaagaaaaacaagaaagggaaaagaggggcccggcgttct
ttgaacaacaacctgattgttatcaagggtttacctaaacttacaggatatattgagtgc
ttgccaacaaaagcatttactggtgatttacaactcctcacgctgaatctgagaaaccaa
tcagaacatgctgtgaagaatataaaaatgaaaattagccatccaaggtttgtaattcct
ggtgattcatcagaccttgaccttgaattcccacagtgcttaagaaagcatgttcaatca
gacagcaatactgtatccgaaggtactaaggaaaatgttaagggttcactatttgcattt
cctcaggatattaaaattcaaggtggtgccacattctcttggcctatttggtttcatgct
gcaactcctggaaacttttctctttatttgtctctttattatgaaatggagagtaccact
gacattccatatcgcacattgcgcatgcattacaatgtggagatcttgccatcacttgat
gtgtcctttgctataagtatgtgttcatccggattgcaagagtatattgtgcgaatggac
gtaatcaacaagactccatcagactcattcgcactgcatcaattgtcatgtgtcggcact
aaatgggcagtttcgacattaccctcgcgcgactccatcagctttgtggaaacagtacca
tcaaaccaggctgtgtcatgcttcttcaagataaaggatttaagtacaagttcgtgtatt
gaggcggcagacggttcctgtggaagtgatatagttttatctcctggggatagtactgat
gtatttgatgtttctcggactcctatcactgatttccactatcaagaaagacaccaacaa
gggaagttagctaaggtgccacgtagtctacttgattttattctgatctcaaaggcagta
gctgttagctcttccaagtcagaacaactgctctctcatcatacttgccactgcagtgct
ctcatccagaatcctgtttggtggcttatggaaggacctcgaacaattactcatgatttc
tcgaagtcatgctgtgaggctaacatcgaactggtgattcacaattcttcagaacataac
actacagtgagagtggttacatctgactgtatggcagagaaaagccagactgccccttca
catgaatttgccagtggtcagggtggatggtatgacgtatcgctggaaaatgacataaaa
gccatcgcaagcacaaagggggcacattctgagaaacaatcatcagaaagcatttcacct
tttgtttggtgttcactgagttccgctcaagttgatctgaaacctgacagttctgctaaa
attcccctaaaagtgtgcatatttgcacccggaacgtacgatttttcaacttatgagctg
cactggcaggtgcattcatctgagagtgggcaagtggatgaaaatgtgacatcaggtggt
ggccaagggtatcctttctatgttaatgttcttcaaggcgcctga
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