Hordeum vulgare subsp. vulgare (domesticated barley): 123452613
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Entry
123452613 CDS
T11213
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03420
Nucleotide excision repair
hvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123452613
09124 Replication and repair
03420 Nucleotide excision repair
123452613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123452613
03400 DNA repair and recombination proteins [BR:
hvg03400
]
123452613
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
123452613
DNA repair and recombination proteins [BR:
hvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
123452613
TCR (transcription coupled repair) factors
Cul4-CSA complex
123452613
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
123452613
NCBI-ProteinID:
XP_044985237
UniProt:
A0A8I6X7V4
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All DBs
Position
1H:513819086..513828552
Genome browser
AA seq
1090 aa
AA seq
DB search
MSTWNYVVTAHKPTSVSHSCVGNFTGPHQLNLIVAKCTRIEIHLLTPQGLQPMLDVPIYG
RIATIELFRPHNEAQDFLFIATERYKFCVLQWDAEKSELLTRSMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCLRPTIVVL
YQDNKDARHVKTYEVALKEKDFVEGPWSQNNLDNGAGLLIPVPAPLGGVIIIGEETIVYC
NANSTFRAIPIKQSITRAYGRVDPDGSRYLLGDNSGILHLLVLTQERERVTGLKIEHLGE
TSVASSISYLDNGVVYVGSRFGDSQLVKLNLQPDATGSFVEILERYVNLGPIVDFCVVDL
DRQGQGQVVTCSGAFKDGSIRVVRNGIGINEQASVELQGIKGLWSLKSSFSDLYDMYLVV
SFISETRFLAMNMEDELEEIEIEGFDAQIQTLFCQNAINDLLIQVTANSVRLVSCTSREL
VDQWNAPEGFSVNVASANASQVLLATGGGHLVYLEIRDAKLVEVKHAQLEHEISCVDLNP
VGENPQYSSLAAIGMWTDISVSIFSLPDLELIRKENLGGEIVPRSVLMCTLEGISYLLCA
LGDGHLFSFLLNASTGELTDRKKVSLGTQPISLRTFSSKGTTHVFASSDRPTVIYSSNKK
LLYSNVNLKEVNHMCPFNTAAFPDSLAIAKEGELSIGTIDDIQKLHIRTIPLNEQARRIC
HQEQSRTLAFCSFKYTQNSMEESEAHFIRLMDHQTFEFLSTHPLDQYECGCSMISCSFSD
DNNFYYCVGTAYVLPEENEPTKGRILVFAVEDGRLQLIVEKETKGAVYSLNAFNGKLLAA
INQKIQLYKWMTREDGSHELQSECGHHGHILALYTQTRGDFIVVGDLMKSISLLVYKHEE
SAIEELARDYNANWMTAVEMIDDDIYVGAENSYNLFTVRKNSDAATDEERGRLEVVGEYH
LGEFVNRFRHGSLVMRLPDSEMGQIPTVIFGTINGVIGIIASLPHDHYVFLEKLQATLVK
FIKGVGSLSHEQWRSFHNDKKTSEARNFLDGDLIESFLDLNRSKMEEVAKAMAVPVEELS
KRVEELTRLH
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgtggaactacgtcgtgacggcgcacaagcccaccagcgtcagccactcctgc
gtcggcaacttcaccggcccccaccagctcaacctcatcgtcgcgaaatgcacccgcatc
gagatccacctcctcacgccgcagggcctccagccgatgctggacgtgcccatatatggg
aggatcgcgacgatcgagctcttccgccctcacaatgaggcccaggacttcctcttcatt
gccacggagaggtacaagttctgcgtcctgcagtgggacgcagaaaaatcagagcttctc
actagatccatgggagatgtttctgatcgcatcggccgccctacggacaatggacagatt
gggatcatcgaccctgactgtagacttattggccttcacctctatgatgggttgtttaag
gttataccattcgacaacaaaggacagctgaaggaagctttcaatatcagactagaagag
cttcaagtgttggacataaagttcctgtatggctgtctcagacctacgatagttgtcctc
taccaggataacaaagatgccaggcatgttaagacatatgaagttgcactgaaggagaaa
gatttcgtcgagggcccttggtcacagaacaatttagacaatggagctggtcttttaata
cctgtaccagctccactcggcggtgtcataattattggtgaggagacaatagtttactgc
aatgctaattctacatttagagctataccaatcaaacagtccatcacaagagcttatgga
agggttgacccagatggctctcgctatttacttggtgataattcaggcattttgcattta
cttgtccttacccaggaacgagaaagggtaactggtttgaaaattgagcatttgggagag
acttcagttgcatcgtcaatatcgtatcttgataatggtgttgtctatgttggttctcgg
tttggtgattcacagctggtaaagctgaatctccaacctgatgcaactggttcattcgtc
gaaatccttgaacggtatgtgaatcttggacctattgtggacttctgcgtggttgacctt
gataggcaagggcaaggtcaggtggtcacttgttcaggagcattcaaagatggttccatt
cgagtggttcgtaatggtatagggattaatgagcaggcttcagtagagctgcaaggcatc
aagggattatggtcactgaagtcttccttcagtgacctgtatgacatgtatctggtggtg
agctttataagtgagactaggttcttggctatgaacatggaagatgaattagaagaaatt
gagatagaagggtttgatgcacaaatccagactttgttctgccaaaatgctatcaatgat
ctgcttatacaggttaccgctaattctgtccggttagtcagttgcacttctcgggagcta
gtggatcaatggaatgcaccggaaggattttcagtcaatgttgcatcagctaatgccagt
caggtcctgttggctactggtggtggccatctcgtttacctagagattagggatgctaag
ttggttgaagtgaaacatgcgcagctagaacatgagatttcttgtgttgatttgaaccca
gtaggggagaatccacagtatagctctctggctgctattgggatgtggactgatataagt
gttagcatattttcacttcctgaccttgaattaatcaggaaggaaaatttaggtggagaa
attgttcctcggtcagttctgatgtgcaccttggaagggatttcatatttgctttgtgct
cttggagatggtcaccttttcagttttctattgaatgcaagcacaggtgaactaaccgat
agaaagaaggtttctcttggtacccagccaattagccttcgtacattctcatcaaagggc
acaacccatgtgtttgcttcgtctgatagaccaactgttatctacagtagcaataagaag
ctgctgtacagcaatgtcaatctgaaagaagttaatcatatgtgtcctttcaatacagct
gcttttcctgacagccttgcaattgctaaagaaggtgaactttcaattggaactattgat
gatattcagaagcttcatatccgcacgattccgttgaatgaacaagcacggcgcatttgc
catcaggaacagtccaggacactggcgttctgcagtttcaagtacacacagaatagcatg
gaggagagcgaggcgcatttcattcgtctgatggatcatcaaacttttgagtttctgtct
acacatcctctcgatcaatacgaatgtggttgctccatgattagctgctcgttctcggat
gataataacttctattactgtgtgggaacagcatatgttttacctgaggagaatgaaccc
acaaagggccggatccttgtatttgcagttgaggatggaaggttgcaattaatcgtagag
aaagaaacgaaaggagctgtctattctctaaatgcattcaatgggaaattgttggcagct
atcaaccagaagattcagttatacaagtggatgacaagggaggatggttcgcatgagctg
caatctgaatgtggccatcatgggcacatacttgccctgtatacccaaactcgtggtgat
ttcattgtagtcggggacctgatgaagtcgatatctttgctcgtgtacaagcatgaggag
agtgcgatcgaagagcttgctagggactacaacgcgaactggatgactgcagttgagatg
attgacgatgacatctatgttggtgcagagaacagctacaacctcttcaccgtgcgcaag
aacagcgatgcggccacagacgaggagaggggtaggctggaggtggtcggggagtaccac
ctcggagagtttgtcaacaggttccggcacgggtcacttgtgatgcgcctcccagactct
gagatgggccagatccccacggtcatctttggcaccatcaacggggtcattggtatcatc
gcctccctgccccacgaccactatgtgttcctggagaagctccaggcaaccctggtcaag
ttcatcaagggcgtgggcagcctgagccacgagcagtggcggtcgttccacaacgacaag
aagacgtcggaggcccgcaacttcctggacggcgacctgatcgagtcattcctcgacctc
aacaggtccaagatggaggaggtggccaaggcgatggcggtccctgtcgaggagctgtcc
aagcgggtggaggagctgacgagactgcactag
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integrated database retrieval system
