Hordeum vulgare subsp. vulgare (domesticated barley): 123452704
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Entry
123452704 CDS
T11213
Name
(RefSeq) TATA-binding protein-associated factor BTAF1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvg03021
]
123452704
Transcription machinery [BR:
hvg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
123452704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TOR1L1_N
HEAT_EZ
HEAT_ECM29
HEAT_2
TPR_Trm732_C
HEAT_MROH2B_C
HEAT_GCN1
HEAT_GCN1_C
ARM_TBCD_2nd
HEAT_GCN1_C_2
Vac14_Fab1_bd
Adaptin_N
UTP20
Motif
Other DBs
NCBI-GeneID:
123452704
NCBI-ProteinID:
XP_044985352
UniProt:
M0VUU3
LinkDB
All DBs
Position
1H:complement(514900073..514914102)
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AA seq
2069 aa
AA seq
DB search
MAAQSSSRLHRLLTLLDTGSTQATRSAAARQIGEIAKTHPQELNALLKKVSQYLRSKNWD
TRVAAAQAIGAIAENVKHTTVKDLFAAVEAEKHASGLSDETGDVGSALPLPDTTATSELA
FGSFDINRVLEFGSPLLSSGGQEFDVANDNGKNPADRLARQKQNLRRRLGLDVCEQFMDF
NDVFKDEDLLAQKNYWGANVQNNGFYSYNSGQNIQHLVASMVPRYPKHSTFRPKRLSARE
RNMLKRKAKSNAKDHTKSVTEDEEVVLKNSASSNGASSDQAGAYNDASDTVADEDNVEYS
DSGRWPFQQFVDQLILDMFDPIWEVRHGTIMALREILTHQGACAGVYFPDLSSPFADLDD
KTDLDTLKKPHGIDLNEEIDVEHLEPVLKKHKKEEPNPSEIMLEPVVERHMEEEKPIPSE
IMDIDVDKELVNPDDSKAEADLSNVLTVSSGEPNSAHVKVEPELHLDSSTDPSKVEVSCT
SLHSVPNLASNPSSVVHAPENSKYVKLMKLAKYSCMKNWEFLQDCAIRFLCALSLDRFGD
YVSDQVVAPVRETCAQALGAVLKYMHPSLVCHTLNILLQMQRRQEWEVRHGSLLGIKYLV
AVRKEMLKDLFEYVLHACKAGLEDPDDDVRAVAAEALIPAAASLVRLNDQMLNSVVMLLW
DILLDLDDLSPSTSSVMNLLAEIYSQPEMVPRMLGTAALSEIEFDLNKATQIAEQEDKLA
YSENPYVLATLTPRLWPFMRHSITSVRRSAIRTLERLLEVGNTRSSAGDTPSKFWTTSIL
GDSLQVVFQNILLESNDEILQSSERAWKLLLQCPEKDLECAAMSYFSNWVQLATTPYGST
LDSTKMFMPVALPRGSRSRAAKIRTAKLENESSRMISFGPTGENTSHEKQFDVSSNVPKI
IVGADSDKSVTHTRVLTAMALGLFASKLPVGSWQVVLTPLANDVMSLSGVQRQVASLVIV
SWFKDLRGRDLAAVGTLLAFFSSVKEYLLDLLSCSDPSFPTKGSVLPYSELARTYTKMRN
EATNLFRAVESCAIFKDYASSLNFNVDMLSVDDAITFASRLSLPAEFDPPSDSEKIVLNN
IESAKQGLLSTSGYLKCVQNNLHVTVSSLVASAVVWMSGLPSKLNPVILPLMAAIKREQE
ELLQDKAADALAELIFGCVGRKPGPNDKLTKNLCTLACTDISETPQAAVINSIQVIEDQN
LLSIGKRFSNHKSRGHVNSGGDERTKTEGYISRRGSELALKHLCEKFGSSLFEKLPKLWD
CLTEFLEPIKIEDAIQKDDPSIAQLGRSCEDKDPQSLINNIQVVRSITPHLPEPLRPQLL
SLLPCILGCVRHSHVAVRLAAARCITSMAKSLTGNVMVVVIENAIPMLSDSSSVCARQGA
GMLLSLLVQGLAVELVPYAPFLVVPLLRCMSDPDGSVRQSVTHSFAALVPLLPLAKGVPL
PSGLSERLYSSTDDAQFLEQLLDNSQIDDHKLNIHLSVELRRYQQEGINWLAFLRRFKLH
GILCDDMGLGKTLQASAIVASDIAESRARNDDKDPKSLIICPSTLVAHWEYEVEKYIDST
IMKPLQYTGSSQDRMTLRGQFDKFNVIITSYDIIRKDIDFLESIIWNYCVLDEGHIIKNS
RSKITSAVKQLKAQHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFQSTYGKPLIAA
KDSKCSAKDAEAGILAMEALHKQVMPFLLRRTKDEVLSDLPEKIIQDRHCNLSHLQLKLY
DKFSSSNAKEEISTIVKANESEPSTSQPKATRHVFQALQYLLKLCSHPLLVIGESPPDYI
VEHLKEIGMGTGDELHELHHSPKLVALQEILHECGIGSETSSPDASAAVGQHRVLIFAQH
KAFLDIIEKDLFQSHMRSITYLRLDGSVQTDKRFEIVKTFNSDPTIDVLLLTTHVGGLGL
NLTSADTLVFMEHDWNPMKDLQAMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFKVS
VANAVINSENASLKTMNTDQLLDLFTSTPASRKASVLPSSSSATEEESNKGKSGRKGLKS
ILSGLDELWDQSQYADEYDMNQFLAKLNG
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcagagctcctcccgccttcaccgcctcctcacattgctcgacaccggttcg
acacaagccacaaggtccgcggccgcgcgccagatcggagaaatcgcaaagacacatcca
caggagctaaatgctctgttgaaaaaggtttctcagtaccttcgtagtaagaattgggac
acaagggttgctgcagctcaggcgatcggtgccatagcagagaatgtcaagcacacgaca
gtcaaggacttgtttgcagccgtggaagcagaaaaacatgcttccgggttatctgatgaa
actggtgatgttgggtcagcattgccacttcctgatactactgcaacatctgagcttgct
tttggaagctttgatataaacagggtactggaatttgggtctcctttgttgtcatcgggt
ggacaggaattcgatgttgctaatgataatggcaagaatccagcagaccgcttagctcgc
caaaagcaaaatcttcggcggcgtttaggtctcgatgtgtgcgagcagtttatggatttc
aatgatgttttcaaagatgaggatcttcttgcccaaaagaattattggggtgcaaatgtc
caaaataatggattttattcgtataatagtggtcagaatattcagcacttggttgcctcc
atggttcctaggtatccaaaacattctacttttcgacctaagcggctaagtgccagggaa
cgtaatatgctgaagcggaaagcaaagagcaacgcaaaggatcatacaaagtctgtaacg
gaggatgaggaggttgtgctgaaaaattctgcatcgtccaatggagcttcttctgaccaa
gctggcgcatataacgatgcttctgacacagttgcagatgaagacaatgtggagtacagt
gacagtgggagatggccttttcaacagtttgttgatcagcttattcttgacatgtttgac
cctatttgggaagttcgccatggcaccattatggctttgagggaaattttgacacatcaa
ggtgcttgtgctggagtatatttccctgatctgagctcaccttttgctgatctggatgat
aaaaccgatttggacaccctgaaaaagcctcatggtattgatcttaatgaagaaattgac
gtggaacatcttgaaccagttttgaagaaacataagaaagaagagccaaatccttctgag
attatgcttgaaccagttgtagagagacacatggaagaggagaagccaattccttccgag
attatggacattgacgtggataaggagttggtcaatcctgatgattcgaaagccgaagca
gatttgagtaatgtgctcactgtatcgagtggtgaacctaattctgctcatgtaaaggtc
gagccagagttgcaccttgatagttcaactgatccctctaaagtggaagtatcttgtaca
tcactccacagtgtacccaacttggcatcaaatccaagttccgttgtacatgctcctgaa
aattcgaaatatgtgaaactgatgaaattggccaagtactcgtgtatgaagaattgggag
tttcttcaagattgtgcaattcgtttcctttgtgcactctcactggaccgctttggtgac
tatgtatctgatcaagtggttgcccctgtccgtgaaacttgcgctcaagctcttggtgct
gttctgaagtacatgcatccttctttagtgtgccatacactaaatatcttgctgcaaatg
cagcgcaggcaagagtgggaagttcgtcatgggagcctccttggaatcaaatacttggtt
gcggttcgcaaggaaatgcttaaagatctgtttgagtatgtccttcatgcttgtaaggct
ggcctggaagatccggatgatgatgtccgtgctgtagctgcagaggccctgatccctgct
gctgcttctttagttagactaaatgatcaaatgctgaattcagttgtgatgttgttatgg
gatatattgcttgaccttgatgacctaagcccatctacaagcagtgtaatgaatttgtta
gctgagatatactcgcaaccagagatggttccaaggatgcttggcacggcagccttaagc
gagatagaatttgatctgaacaaagctactcagatcgctgagcaagaagacaagttggca
tacagcgagaacccttatgttttagccacactgacaccccgtctgtggccttttatgaga
cacagtattacgtcagtacggcgttctgcaatacgaacattggagaggcttcttgaggtt
ggcaacaccaggagttcagctggagacactccatctaaattctggactacatccatatta
ggtgactcactgcaggttgtcttccagaatatacttttggagtcgaatgatgagattctt
caatcttctgaaagggcttggaaacttctacttcagtgccctgagaaggaccttgagtgt
gctgcaatgtcatattttagtaattgggtgcaacttgctactactccatatggctcaaca
ttggattctacaaaaatgtttatgccagttgcccttccccgaggaagccgttcaagagct
gcaaagataagaactgcaaagctagaaaatgaaagttcaagaatgatatcctttggtcct
acaggagaaaatacttcacatgagaagcaattcgatgtttcctcaaatgttccaaagata
attgtgggggctgattctgacaaatctgttactcatacacgagtgctgacagcaatggcc
cttgggctttttgcctcgaagttgccagttggctcgtggcaagttgttcttactccactt
gctaatgatgtcatgtctctctcaggagtccagagacaggtggcttctttggttattgtt
tcttggtttaaagacctcagaggaagagatctcgctgcagtggggacattgctagctttc
ttctcctctgtgaaagagtaccttttggacttgctgtcttgctctgatccgtcatttcca
acaaaaggctccgtgcttccctattctgaacttgcaagaacatacacaaagatgcgcaat
gaggccactaacttgttccgtgcagtagagtcttgtgctattttcaaagattatgctagc
agcttaaattttaacgttgacatgctgagcgttgatgatgctattacttttgcttcaagg
ctttcgttacccgctgagtttgatcctccttctgacagtgagaaaattgtcctgaataac
atagagtcagcaaaacaaggcctgttgtctacatcaggctatttgaagtgtgttcagaac
aatttgcacgtcactgtctcgtctttagtggcttccgctgttgtctggatgtcagggtta
ccaagcaagttgaacccagtcattttacctttaatggctgcaataaaaagagaacaggag
gaactacttcaagacaaagctgcagatgcacttgcggagctcatttttggttgcgttggt
cggaagccaggccccaatgacaagctaacaaagaatctctgcaccttagcatgcactgat
atcagtgagacacctcaagctgcagttatcaattcaatacaggttatcgaggaccaaaat
ttgttgtcaatcgggaagcgttttagcaaccacaaatccaggggtcatgtgaattctggc
ggtgacgaaagaacaaaaacggaaggttatataagccgtcgtggatcagagttggcttta
aagcacctttgtgagaaatttggatcatcattattcgaaaaactcccaaagttatgggat
tgccttaccgagtttcttgaaccaattaagatcgaagatgccattcagaaagatgatcca
agtattgcacaactaggtagatcttgtgaggataaggacccacagtccctcataaataac
atccaggttgttcgttcaattacacctcacctacctgagcccttgaggcctcagctgtta
agtctccttccctgtattcttgggtgcgtgcgtcattctcatgtggctgttaggttagct
gctgccagatgtatcacatcaatggcgaagtcactgactggtaatgtgatggtagttgtc
atagaaaatgccattccaatgttgtcggattcatcttctgtctgtgcaagacaaggagct
gggatgcttttgagccttcttgtccagggtttggctgtggagttggttccttatgctcct
ttccttgttgtacctcttctgaggtgcatgagcgaccctgatggatctgttaggcagtct
gtcactcacagtttcgctgctttggttcctttgctgccattagcgaagggtgttccgtta
ccaagtggactaagtgagcgcttatatagcagcacggatgacgcacagtttctggaacaa
ctccttgacaactcccaaattgatgatcacaagctcaacattcatcttagtgtcgagttg
cgcaggtaccaacaagaaggaatcaactggttagcattcctgagacggtttaagttacat
ggaattttatgtgatgacatggggcttggcaagacactccaggcgtctgctatcgtagca
agtgatattgccgagtcacgtgcacggaatgatgacaaagatccaaaatctttaattatc
tgtccttctactttagtagcacactgggaatacgaagtggagaaatacatagacagcact
atcatgaaacctcttcagtacactggctcgtcacaagacaggatgacgctccgtggtcaa
tttgataaattcaatgtcatcataacatcgtatgatattatacgcaaggatattgatttc
cttgagagtatcatttggaactattgtgttctggatgaagggcacataataaaaaattca
agatctaaaataacgtctgctgtgaagcagttgaaagcacagcaccgtcttatcttgagt
ggaactccaattcagaacaatgtattggaattatggtctctattcgacttccttatgcct
gggtttcttggaacagaaaaacagttccaatctacatatgggaaaccactgatagcagct
aaagattccaaatgttcagcaaaggatgctgaagcaggcattcttgcaatggaggcacta
cataaacaggtcatgccatttctactcagaagaaccaaggatgaagtcttatcggatctt
ccagagaagattatccaggatagacactgcaatctcagccacttgcagctgaaactctat
gacaagttctccagctccaacgcgaaagaagagatttcaactatagtgaaagcaaatgaa
tcagagccgtccacctctcaaccaaaggcaactcgtcatgtgttccaggcactacaatac
ctattgaagctctgtagccatcctttacttgttattggggagagcccacctgactatatc
gtggagcatctaaaagaaataggcatgggaactggtgatgagctgcatgagctgcaccac
tctcctaaacttgttgctcttcaagagatactgcacgagtgtggtataggatcagaaaca
tcaagtcctgatgcttctgcggctgttgggcaacacagagttttgatttttgctcaacat
aaggctttccttgatattattgagaaggacctgtttcagtcccatatgagaagcatcacg
tatttgcggcttgatggctctgttcaaacagacaagagatttgaaattgtcaagacgttc
aattcggacccaaccatcgatgtgcttctactaacaactcatgtcggtggtctgggcttg
aatttgacgtctgccgacactttggtcttcatggaacatgattggaacccaatgaaggat
ctccaggcaatggacagagcacatcgtctgggccaaaggaaagttgtgaatgtgcaccgt
ctcattatgcgcggcaccctggaggagaaagtgatgagtctccagcggttcaaggtgtcg
gttgccaacgccgtcataaattctgagaatgctagcctgaagaccatgaacactgaccag
ctactcgatttgttcacttcaacccctgcttccagaaaggcgtcggttctcccaagcagt
tcgagtgccacggaagaagagagcaacaaggggaaatcaggtcgcaagggcctcaagtca
atcctgagcgggctggacgagctgtgggaccagtcgcagtatgcggacgagtatgatatg
aaccagttcctggcaaagctcaacgggtga
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integrated database retrieval system
