Hordeum vulgare subsp. vulgare (domesticated barley): 123452734
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Entry
123452734 CDS
T11213
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B-like
KO
K03253
translation initiation factor 3 subunit B
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvg03019
]
123452734
03012 Translation factors [BR:
hvg03012
]
123452734
Messenger RNA biogenesis [BR:
hvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
123452734
Translation factors [BR:
hvg03012
]
Eukaryotic type
Initiation factors
eIF-3
123452734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
ANAPC4_WD40
RRM_1
WD40_WDHD1_1st
Beta-prop_ELP1_1st
BORG_CEP
Motif
Other DBs
NCBI-GeneID:
123452734
NCBI-ProteinID:
XP_044985379
UniProt:
F2CS01
LinkDB
All DBs
Position
5H:548758964..548763467
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AA seq
721 aa
AA seq
DB search
MALAISMEAIDARARELGIDLDSVDVDSITLPPGEDFDILSDDEDLLQNEDIPELEMGFS
NIIVVDNLPVVPPEKYEKLENVVRKIYSQIGVIKEGGLWMPTHPETKKTYGYCFIEYNTP
QEAELAREKTNGYKLDKSHIFAVNMFDDFEKYMKVPDEWAPAEIKPYTPGENLLKWLTDD
KARDQFVIRAGTFTEVYWNDARRAMPELVYQKQYWTDSYIQWSPLGTHLATVHRQGAQVW
GGDDKFVRLMRFAHPQVKLIDFSPGEKYLITYSSQEPSNPRDTHRVLLNIFDVRTGKVMR
DFKGSADDFTTGGNMGVSGVSWPIFRWGGGRDDKYFARLGKNVISVYETETFSLIEKKSL
KVENVVDFSWSPTDPIISLFVPELGGGNQPARVSLVQIPGKEEIRQKNLFSVSDCKMYWQ
NNGEYLAVQVDRYTKTKKSIYTGFELFRIKERDIPIEVFELDNKNDKIIAFAWEPKGHRF
AVIHGDGPKPDISFYTMRAVNNNVSRVSKLTTLKGKQANALFWSPAGRFIVLAGLKGFNG
QLEFFNVDDLETMATGEHFMATDIMWDPTGRFLATAVTSVHEMENGFQIWSFNGKLIYKI
SKDHFYQFQWRPRPPSLLTPEKEEDISKNLKRYSKKYEQEDQDVSNQVGEQERKRRTQLQ
EEWLAWVAKWKQLHEEERSYRMELRGGEESDKEEEAEYKEIEAEELVDVTEEIVAFDLDQ
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgcaatctcgatggaagccatagacgcgcgcgcgcgggagctcgggatcgat
ctcgactccgtcgacgtcgactccatcaccctcccgcccggcgaggacttcgacatcctc
agcgatgatgaggatttacttcagaatgaagacattccagagcttgagatgggcttttca
aacattattgtggtggacaatctgccggttgttcccccagaaaagtatgagaagctggag
aacgttgtacgcaagatatacagtcaaattggtgtgatcaaagaaggtgggctttggatg
cctacacacccagagaccaagaagacctacggctactgcttcattgagtataacactccg
caggaagctgagcttgccagggaaaaaacaaatggctacaaactggacaaatctcacata
tttgctgttaatatgtttgatgactttgagaagtacatgaaagttcctgatgaatgggcg
ccggctgaaatcaagccatacactcctggagaaaatcttctgaagtggctaactgatgat
aaggccagagatcagtttgtgatccgtgctgggacgttcactgaagtttactggaacgac
gccagacgggcaatgcctgagcttgtgtaccaaaagcagtactggacagatagttatatc
caatggtcccctcttggaacacacttggctaccgtgcataggcagggcgctcaggtgtgg
ggtggtgatgataagtttgttcgtctaatgcgctttgctcatccacaggtgaaactcatt
gatttctctcccggtgagaaatatttgatcacttacagcagccaggagcccagcaaccct
agggacacacatagggtcctactaaatatcttcgatgtacgcactggaaaagtgatgcgg
gacttcaagggaagtgctgatgatttcactactggtggaaatatgggtgtctctggtgtt
tcatggcctatcttcaggtggggtggtggaagagatgataagtattttgctagacttgga
aagaatgttatatctgtctatgagactgagacgttctctcttatcgagaagaagtccctg
aaggtagaaaatgtggttgacttcagttggtctcccactgatcctatcatatcactcttt
gtgcctgaattgggtggtggaaatcagcctgccagggtgagtcttgtgcaaattccgggc
aaagaggagattcggcagaaaaaccttttcagtgttagcgactgcaaaatgtactggcag
aacaatggagaatatctggctgtccaggtagacaggtacacaaaaacaaagaagagcatt
tacactgggtttgagctgttcagaatcaaggaacgagacatcccaattgaggtctttgaa
ttggacaacaagaatgacaagattattgcctttgcatgggagcccaaaggccaccgcttt
gctgttattcacggtgatgggcccaagcctgatatcagtttctacaccatgcgcgcagtc
aacaataacgttagtcgtgtgtccaagctcaccacactcaagggcaagcaggccaatgca
ttgttctggtctcctgctgggcgtttcattgttctggcagggctgaagggcttcaatggc
cagctggagttcttcaacgttgatgatcttgagaccatggcgacaggagaacattttatg
gcaactgacatcatgtgggaccctactggaagattcctcgcaactgcagttacctcggtt
catgagatggaaaatggttttcaaatttggtccttcaatgggaagctaatttacaagatt
tcaaaggatcacttctatcagttccaatggcgcccaaggccaccatcactacttactcct
gagaaggaggaggacatctcaaagaacctcaagcggtacagcaagaagtacgaacaggag
gatcaggacgtgtccaaccaggtgggcgagcaggagcgcaagaggcgcacacagcttcag
gaggagtggttagcatgggtggccaagtggaagcagctgcacgaggaggagcgatcatac
aggatggagctgagaggcggggaggagagcgacaaggaggaagaggcggagtacaaggag
attgaggcggaggagttggtggatgtcacagaagaaattgttgcctttgacctggaccag
gagtga
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