Hordeum vulgare subsp. vulgare (domesticated barley): 123452778
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Entry
123452778 CDS
T11213
Name
(RefSeq) cactin
KO
K25058
cactin
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvg03041
]
123452778
Spliceosome [BR:
hvg03041
]
Complex C
Other components
Complex C specific factors
123452778
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Gene cluster
GFIT
Motif
Pfam:
CactinC_cactus
Cactin_mid
SR-25
Motif
Other DBs
NCBI-GeneID:
123452778
NCBI-ProteinID:
XP_044985427
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Position
5H:550226483..550233843
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AA seq
707 aa
AA seq
DB search
MMCGPDTASPNLCSVNRPGSITTPNLHDQPPFPPAADMPRKEREAEGSRSSSRRRRRRSP
SDSDDTSDSGGSPRRGRSRHRRRSRRKAAPSSSSSSSGASDSQASGSGSDSGDRQRRRSR
SAKRGGVTEEQILEYMSKKAQKKAEKVAKKMKANAVSGYSNDSNPFGDPNLTENFVWRKK
IDRAVTEGQKVDISVKAEKKKQRERMAEIEKVKKRREERAIEKAQHEEEMALLARERARA
EFQDWEKKEEEFHFDQSKFRSEIRLREGRTKPIDVLLKNLNFADEFDVELNEPYLVFKGL
TVKEMEELRDDIKMHLDLDRESQVNVKYWEALMVVCDWELGEARKRDAVDRARVRGEEPP
REVEERGLHASIEGDVKDLLEGKTSTELEEMQNQIESQMRSGTAKVVEYWEAILKRLHIY
KAKACLREIHASLLRKHLHRLENAAAPEQAVEADEELDTKEEDVMHDEEEDDKRYSPEPI
EHIAEATESHLDEEDGSFSPELMHGNEDEDAIDPDEDKAELDRQREAVVTEHQRKVKEVM
TAKARKPDELELKAMKTMGAMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHT
GYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKSKAPIYTIEKDGSAGETCHIRFH
AGPPYEDISFRIVNKEWEYSHKKGFKCTFERGILHLYFNFKRYRYRR
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcggcccagataccgccagccccaatttgtgttcagttaatcggcccggctcc
atcaccacgccaaatctccacgaccagccgccttttccccccgccgccgacatgcctagg
aaggagcgcgaagccgagggcagccggagctcgtcgcggcggcggcggcggcggtcgccg
tccgactcggacgacacctccgactccggcggctcgccccgccggggcaggagccgccac
cgccgcaggagccgccgcaaggccgccccgtcctcctcctcctcctccagtggcgcgagc
gattcgcaggcgtccggctcaggctccgactccggggaccgccagaggaggcggagcagg
agcgccaagcgcgggggcgtcaccgaggagcagatcctggagtacatgtccaagaaggcg
cagaagaaggccgagaaagtggccaagaagatgaaggccaacgcggtgtcggggtactcc
aacgactccaacccttttggcgatcccaatctcacagagaactttgtttggcgaaagaag
attgatcgtgccgtaactgaaggacagaaggtggacatttctgtcaaagctgaaaagaaa
aagcagagggaaagaatggctgaaatagagaaggttaagaaaagaagggaggaaagagca
attgaaaaagctcagcatgaggaggaaatggcattgttagccagagaaagagcacgtgct
gagtttcaagattgggagaagaaagaggaagagtttcattttgatcaaagcaaatttagg
tctgagatcagattacgggagggacgtacaaagcctattgatgttctcctgaagaatctt
aacttcgcagatgaatttgatgttgagttaaatgagccctacttggtgttcaagggatta
acagtgaaggaaatggaagagttacgtgatgacattaagatgcatctcgatctggacagg
gaaagccaagtaaatgtcaagtactgggaggcactcatggtagtgtgtgattgggagcta
ggtgaggctcggaaaagagatgccgtggaccgggctagggtgcgtggtgaggaaccaccc
cgtgaggttgaagagagaggcttgcatgcaagtattgagggggatgtaaaagatctcttg
gagggtaagacttccacagagctagaagagatgcaaaatcaaattgagtcccagatgcgc
tctggaactgcaaaagttgttgaatactgggaggccattttgaaacgccttcatatatac
aaagcaaaggcttgcctgagggaaatccatgcttctctcttgcggaagcatctgcatcgt
ctagagaatgctgctgctcctgaacaggctgtagaagctgatgaagaattagacactaaa
gaggaggatgtgatgcatgatgaggaagaagatgataaacgatattcgccagaacctata
gaacatatcgctgaagcaacagagagccatttggatgaggaagatggctccttctcgcct
gagctaatgcatggcaatgaagatgaagatgcaattgatcctgacgaggacaaggcagaa
ctggatcggcaacgtgaagctgtagttaccgagcatcaaaggaaagttaaggaggtcatg
acagctaaggcaagaaaaccagatgagttggagctgaaggcaatgaaaacaatgggagca
atggaggagggggatgctgtatttggttcaggtgctgaagtgaacctggattcacaggtg
tactggtggcatgacaagtaccgaccaaggaaaccaaagtacttcaatcgtgtgcatact
ggatacgagtggaacaaatacaatcaaactcattatgatcacgacaacccacctcctaaa
attgtccagggctataagttcaacatattttaccctgatcttgtggataaatcaaaagca
ccaatatacactatagagaaagatggaagcgctggggagacatgccatataaggtttcat
gctggccctccgtatgaggatatttctttccgtatcgtgaacaaggagtgggagtactca
cacaagaagggcttcaagtgcacatttgagcgtgggattcttcatctgtatttcaacttc
aagcgataccgctacaggcgatag
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