Hordeum vulgare subsp. vulgare (domesticated barley): 123452849
Help
Entry
123452849 CDS
T11213
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvg03019
]
123452849
03041 Spliceosome [BR:
hvg03041
]
123452849
03036 Chromosome and associated proteins [BR:
hvg03036
]
123452849
Enzymes [BR:
hvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123452849
Messenger RNA biogenesis [BR:
hvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123452849
mRNA cycle factors
Common to processing body (P body) and stress granule
123452849
Spliceosome [BR:
hvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123452849
Chromosome and associated proteins [BR:
hvg03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123452849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
123452849
NCBI-ProteinID:
XP_044985504
LinkDB
All DBs
Position
5H:complement(553526095..553531356)
Genome browser
AA seq
635 aa
AA seq
DB search
MRSSWADSVANAEESAPATGAAAAPVANHQNSRPTRSSYVPPHLRGGGRSPDNQVLAAGP
TPAGAYPSGAVQPSGGYAAAVGGTRWAAPPGGGSAGVGVVRQGGGGGRGGVGGGGGGWNS
RPGGWGDRRDREPNPFGDSEPAAVDVDFESQANTGINFDAYEDIPVETSGHDVPAAVNTF
AEIDLGDALNENIRRCKYVRPTPVQRHAIPIVIGGRDLMACAQTGSGKTAAFCFPIISGI
LKTKPPIRPRARTAFPLALILSPTRELSVQIHEEAKKFAYQTGVKACVAYGGAPIHQQLR
ELERGVDILVATPGRLMDLLERARVSLQMVNYLALDEADRMLDMGFEPQIRKIVEQMDMP
PRGVRQTMLFSATFPKEIQRLASDFLADYIFLAVGRVGSSTDLIAQRVEFVLEADKRSYL
MDLIHAQKANDVPGKNSLTLVFVETKRGADALENWLYTNGFPATSIHGDRTQQEREYALR
SFKSGATPILVATDVAARGLDIPDVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFF
NEGNMSLARPLCELMQEANQEVPQWLERYSARSSFGGGGGGRNRRSGGGGARFGGRDFRR
DTRGGGGGGGGGYGGGGGGYGGGGGYGGGASSSWD
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcttcatgggctgattcagttgcgaacgccgaggaatcggcgcccgcgactggt
gctgctgctgcccctgttgccaaccaccagaactcgcgtcccactcgcagctcttacgtc
cctcctcacctccgtggcggtggccgctcgccagataatcaggtgctagctgcaggccca
acaccagctggtgcatacccctcgggtgctgtgcagccttctggtgggtacgcagccgct
gttggtggcactcgctgggctgcccctcctggcggcggtagcgctggcgtaggtgttgtc
cgccagggtggtggtggtggacgtggtggtgttggtggcggcggcggtggctggaactcc
cgccctggtggctggggggaccgcagggaccgtgaaccaaacccttttggtgatagtgag
ccggcagctgtggatgttgactttgagagtcaagcgaacacaggtatcaattttgatgcc
tatgaggacattcctgtggagacaagtggccacgatgtgcctgcagcagtcaacacgttt
gcagagattgacttgggtgatgcactgaatgagaatatacggaggtgcaagtatgtgagg
cctacacctgtgcagcgccatgccattccgattgtcattggaggcagggatctgatggcc
tgtgctcagactggatctgggaagactgctgctttttgtttcccgatcatcagtgggatc
ctaaagacaaagccaccaataaggccaagagctaggactgcatttcctcttgctctgata
ttatctcctactcgtgagctatcagtacaaattcatgaagaagcaaagaaatttgcatac
cagactggtgttaaggcttgtgttgcatatggtggagcaccaattcatcagcagttgagg
gaactggaaagaggtgttgatatacttgtggcaactcctggtcgtttgatggatctgctg
gagagagctagagtatcactgcaaatggtgaattacttggctcttgatgaagctgaccgg
atgcttgatatggggtttgagccacagatacgcaagattgttgagcagatggacatgccc
cctcgtggtgtgagacagactatgctgttcagtgctacttttccaaaggaaatacaacgt
ctggcgtcagatttccttgcagactacatcttccttgctgttggaagagttggttcaagt
accgatttgattgctcaaagggtagagtttgtccttgaagctgataaaagaagttacctc
atggaccttattcatgcacagaaggctaatgatgttcctggaaagaattctcttactttg
gtctttgtggagacaaagaggggcgctgatgctttggagaactggttatatacaaatgga
ttccccgcaacaagtattcatggagatcgtacacaacaggaaagggagtatgcccttaga
tccttcaagagtggagcaacacccatccttgttgcaactgatgttgctgctcgtgggctt
gacataccagatgttgcccacgtcatcaattttgatctgccaaatgacatagatgactat
gttcaccgcattgggagaactggaagagctgggaagtctggtttggcaactgcatttttc
aatgagggcaatatgtcactggccaggccgttatgtgaactgatgcaggaagccaatcag
gaggttcctcagtggctggagcgctattctgcccgttcctcgtttggaggtggcggagga
ggcagaaaccgcagatcaggcggtggcggtgctcggtttggtggacgtgatttccgtcgt
gacacaaggggcggtggtggtggaggaggtggcggctacggaggtggcggtggcggttat
ggtggtggtggaggttatggtggaggcgcgtctagctcgtgggactga
DBGET
integrated database retrieval system
