Hordeum vulgare subsp. vulgare (domesticated barley): 123452899
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Entry
123452899 CDS
T11213
Name
(RefSeq) LOW QUALITY PROTEIN: protein argonaute 4B-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvg03019
]
123452899
03036 Chromosome and associated proteins [BR:
hvg03036
]
123452899
Messenger RNA biogenesis [BR:
hvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123452899
Chromosome and associated proteins [BR:
hvg03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123452899
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
123452899
microRNA pathway
RISC loading complex
123452899
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
123452899
NCBI-ProteinID:
XP_044985571
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Position
1H:515977632..515985015
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AA seq
920 aa
AA seq
DB search
MMESLLMTSCHHHPLCLPTWCPSKHKMLMLLLPXESQPPPPPPSKPAKPRRHIMARPANG
LGKKGQPIQLLANHYKVSVKPSEEFFNHYYVNLKYEDDTPVDSKGIGRKVLDKLQHTYRS
ELADKDFAYDGEKSLFTIGALPQINNEFIVVLEDIASGKTAAGSPGGNNGSPGGGDQKRV
RRPYQAKTFKVELNFAATIPMAAIGQAIRGQESEHSLEALRVLDIILRQHSAKQGCLLVR
QSFFHNNPSSFVDLGGGVMGCRGFHSSFRGTQSGLSLNIDVSTTMIVKPGPVIDFLLANQ
KVDHPDKIDWQKAKRALKNLRIKTTPANSEFKIVGLSERNCNEQMFPLKRRNGDTIDTVE
ITVYDYFVKNRGIELRYSGNLPCINAGRPKRPTYFPVELCTLVPLQRYTKSLSTLQRSAL
VEKSRQKPHERMSTLNDALKRSNYDADPMLKACGISIAQNFTQIEGRVLPAPKLKAGNGE
EFFARNGRWNIARKKLIRTSTVKRWSVVNFSARCDLRGLVQDLKRVATGMGLEYEDPHTV
IEESPALRRAPVARRVEEMFAQIRARLPGAPLFLLCLLPERKNCEVYGPWKKKCLADFGI
VTQCLAPQRVNDQYLSNLLLKINAKLGGLNTLLQIEAARAIPIVGKVPTIILGMDVSHGQ
PGQSDRPSIAAVVSSREWPLISKYRATVHTQSPKQEMMASLFKPRGTEDDGLIRESLIDF
YTSSGKRKPDQVIIFRDGVSESQFTQVINIELEQIIEACKCLDDKWEPKFTVIVAQKNHH
TRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRPTHYHVLHDEIGFSADE
LQEFVHSLSYVYQRSTTAISVAAPIAYAHLAAAQVGTFMKFEDMSDTSSSQGGGHTSVGS
ASVPELPRLHEKVRSSMFFC
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgatggagagcctgctgatgacgagttgccaccaccaccccctctgcctcccaacgtgg
tgcccatcaaagcacaagatgctgatgctgctgctgccangtgagagccaacctccacct
ccacctccaagcaagccagcaaagcctaggaggcacataatggccagacctgccaatggg
ttggggaagaagggtcagcccatccagctgcttgctaaccactacaaagtctctgtcaag
ccttcagaggagttcttcaaccactactacgtcaatctcaagtatgaggatgatacgccg
gtcgatagcaagggcatcggcagaaaggtccttgataagctgcagcacacctaccggtct
gagctcgcggataaggactttgcatatgatggtgaaaagagcctcttcactattggagct
cttcctcagatcaacaatgaattcatcgtggtattggaagacatcgctagtggaaagact
gctgccgggagtcctggaggcaacaatggtagtcctggaggtggcgaccagaagagggtg
aggagaccctaccaggccaagaccttcaaggtggagctcaactttgcggcaacaattcct
atggctgcaattgggcaggccatcagaggtcaggaatcagagcactcccttgaggctcta
cgagttcttgacatcatactgaggcagcattctgcaaaacagggctgccttctagttcgt
cagtcgttttttcacaacaaccctagcagttttgttgacttgggtggtggtgtgatgggg
tgccggggatttcactcaagcttccgtggtacacagagtggactctccctaaacatcgat
gtttcaacaaccatgatagttaaacctggtcctgtcatcgactttcttcttgctaaccag
aaagttgaccaccccgacaaaatcgactggcagaaggccaagcgtgctctcaagaacttg
aggataaaaaccactcctgcaaattcagagttcaagattgttgggttgagtgagagaaat
tgcaatgaacagatgttcccattgaagcggaggaatggggacaccattgatactgttgag
attactgtctatgattactttgtgaagaatagaggcatagaactgcgctactctggcaat
cttccctgcatcaatgctgggaggccaaagcgtccgacctatttccctgtggagctttgc
acgcttgttcctctgcaaagatacacgaagtctctgtcaactctgcagaggtctgcgctt
gtcgagaagtcaagacagaagcctcacgagagaatgtcaacccttaatgatgcacttaag
cgtagcaactatgacgctgaccccatgctgaaggcgtgtggcatttccatcgcgcaaaat
ttcactcagattgaagggagggtcctgcctgctcccaagctgaaagctggtaacggtgaa
gagttcttcgcacgcaacggacgctggaatattgcgaggaagaagctgattaggacaagt
actgtcaagaggtggtccgttgtcaatttctctgcgcgctgcgatcttcgtggtcttgtc
caagaccttaaaagggttgcgactggaatgggacttgaatatgaggatcctcatactgta
attgaagagagcccggcactgagacgagctccggtggcacgaagagtggaggagatgttt
gctcagataagggccaggctacctggagcacccttgttccttttgtgccttctccctgag
aggaagaattgcgaagtttatggtccttggaagaagaagtgtcttgctgatttcggcata
gtcacccaatgtctagctccgcaaagagtcaatgatcagtacttgagtaatttgctactc
aagataaatgctaagcttggtggcctcaacacattgcttcaaatcgaagcagcccgtgca
atacccattgtggggaaggtgcctactatcatcctgggcatggatgtgtcacatggtcag
cctgggcagtccgacaggccttccattgctgcggtggtgagttctcgtgagtggcctctc
atctctaaatacagagcaacagtgcacactcagtcacccaaacaggagatgatggcctca
ttgtttaaaccacggggaactgaagatgatggcctcattcgggaatcacttattgacttc
tacactagttctgggaagcggaagccagaccaggttatcatcttcagggatggagtcagc
gaaagccagtttacccaggtgataaacatcgagcttgagcagatcatcgaggcatgcaag
tgccttgacgacaagtgggagcccaagttcacagtcattgttgctcagaagaaccatcac
accagatttttccagacaaattcgccagaaaatgttcctcctggtacggtggtggataaa
caagtgtgccatcccaagaactttgacttctacatgtgtgcgcatgctgggatgattggc
acgtcgaggccaacgcattaccatgttctgcatgatgagattggcttcagcgcggacgag
ctccaggagtttgtccactcgctttcttatgtgtaccagaggagcacgacggcgatttca
gtagctgctccaatagcgtacgcgcatctggcggcggcgcaggtgggcaccttcatgaag
tttgaggacatgtcggacacttcgtcgagccagggagggggccacacgtcggtgggcagc
gcctcggtgccggagctgcctcggctgcatgagaaagtgaggagctccatgttcttctgc
tga
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