Homalodisca vitripennis (glassy-winged sharpshooter): 124352659
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Entry
124352659 CDS
T09217
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03013
Nucleocytoplasmic transport
hvi03015
mRNA surveillance pathway
hvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124352659
09122 Translation
03013 Nucleocytoplasmic transport
124352659
03015 mRNA surveillance pathway
124352659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvi03019
]
124352659
03041 Spliceosome [BR:
hvi03041
]
124352659
03009 Ribosome biogenesis [BR:
hvi03009
]
124352659
03012 Translation factors [BR:
hvi03012
]
124352659
Enzymes [BR:
hvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124352659
Messenger RNA biogenesis [BR:
hvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124352659
mRNA cycle factors
Stress granule specific factors
124352659
Spliceosome [BR:
hvi03041
]
Complex C
Other components
EJC/TREX
124352659
Ribosome biogenesis [BR:
hvi03009
]
Eukaryotic type
90S particles
Helicases
124352659
Translation factors [BR:
hvi03012
]
Eukaryotic type
Initiation factors
eIF-4
124352659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Cas3-like_C_2
AAA_30
TniB
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
124352659
NCBI-ProteinID:
XP_046658183
LinkDB
All DBs
Position
1:complement(165244008..165263606)
Genome browser
AA seq
402 aa
AA seq
DB search
MSEPRVRRVVTEDLSNVEFETSEDVEVISTFNTMGLREELLRGIYAYGFEKPSAIQQRSI
KPIVKGRDVIAQAQSGTGKTATFSIAILQSLDTTLRDTQVLCLSPTRELAVQIQKVILAL
GDFMNVQCHACIGGTNLGEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVLDEA
DEMLNKGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTSKFMTDPIRILVKRDELTLE
GIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHG
DMPQKERDAIMKEFRSGQSRVLISTDVWARGIDVQTVSLVINYDLPNNRELYIHRIGRSG
RFGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccccgcgtaagacgtgttgtaacagaggatctctccaacgtagaatttgaa
actagtgaagatgttgaagttatatctacattcaatacaatgggtcttcgagaggaactt
ctcagaggaatttatgcatatggttttgaaaaaccatctgccatccaacaaaggtccata
aaacccattgtgaagggacgtgatgtgatcgcccaagcgcagtctggtaccggcaaaaca
gcaacattttcaatagcaattctacagtctctggatacaactctgcgtgacactcaggtg
ctttgtctgtcaccaacaagagaacttgctgttcaaattcagaaggtgattcttgccttg
ggagatttcatgaatgtacagtgccacgcgtgtatcggtggaacaaacctaggtgaggac
ctgcgcaaactggactatgggcagcatgttgtctcaggcacaccaggtcgtgtgtttgac
atgatccgtcgccgtgtgcttcgaactcgctctatcaagatgttggtgttggatgaggca
gatgaaatgttgaataagggcttcaaggaacaaatctatgatgtctacagatacttgccc
ccagcaacccaggttgtgttggtatctgctacactgccacatgagattctagaaatgacc
agcaaattcatgacagatccaatccgtattttggtaaagcgtgatgagttgacactagag
ggtataaaacagttctttgtggctgttgagcgtgaagagtggaagtttgatactctgtgt
gacctgtatgacacattgactatcacacaggctgttatattctgcaacaccaaaaggaag
gttgattggctgacagaaaaaatgcgggaagccaacttcactgtgagttctatgcatgga
gatatgccccaaaaggaacgagatgcgatcatgaaagagttccgctcaggacagagccga
gtcctaatctctacagatgtctgggctcgaggtattgatgtccagacagtttccttggtc
atcaactatgacttgcccaacaatcgagagctgtacattcacagaattggccgatctgga
cgatttggcaggaaaggtgtggccatcaactttgtgaaaaatgatgatatcaggatttta
agagacattgagcagtactactcaacccagattgatgaaatgcccatgaatgttgcggat
ttgatctaa
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integrated database retrieval system
