Homalodisca vitripennis (glassy-winged sharpshooter): 124352789
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Entry
124352789 CDS
T09217
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03030
DNA replication
hvi03410
Base excision repair
hvi03420
Nucleotide excision repair
hvi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124352789
03410 Base excision repair
124352789
03420 Nucleotide excision repair
124352789
03430 Mismatch repair
124352789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hvi03032
]
124352789
03036 Chromosome and associated proteins [BR:
hvi03036
]
124352789
03400 DNA repair and recombination proteins [BR:
hvi03400
]
124352789
DNA replication proteins [BR:
hvi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124352789
DNA Replication Termination Factors
ELG1-RFC complex
124352789
Chromosome and associated proteins [BR:
hvi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124352789
DNA repair and recombination proteins [BR:
hvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124352789
Check point factors
HRAD17(Rad24)-RFC complex
124352789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rep_fac_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA_30
AAA_assoc_2
AAA_24
AAA_11
Rad17
RuvB_N
AAA_16
DNAX_ATPase_lid
AAA_22
Mg_chelatase
AAA_5
bpMoxR
Gp44_lid
SLFN-g3_helicase
ResIII
AAA_7
AAA_19
DUF815
AAA_2
AAA_3
Effector_1
Motif
Other DBs
NCBI-GeneID:
124352789
NCBI-ProteinID:
XP_046658419
LinkDB
All DBs
Position
1:complement(178785480..178793287)
Genome browser
AA seq
359 aa
AA seq
DB search
MESFLKTGKLGKEDVSAKAGMSKMKPKKESKLTPWVEKYRPRSMDEVVEQHEIVAVLKQC
LTGADLPHFLFYGPPGTGKTSTIIAAARQLFGDIYKERILELNASDDRGIQVIREKVKNF
SQLTASSVRPDGRPCPPYKIVILDEADSMTSAAQAALRRTMEKETRSTRFCLICNYVSCI
IQPLTSRCTKFRFKPLGQEKMLDKLKEICDAEDVKCEPEAMKLLVEMSGGDMRRAITCLQ
SCSRLKAGDQISTSDVFEVTGIVPNHWIKGLMEVCEIKDYQKLEDYIDKMMMEAYSASQI
LDQVQKSVIDSLELTDVQKANICEKIAVCSWRLQDGASEFLQLMDLCYTIVKAHKSVTV
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggagtcttttcttaaaactgggaaacttgggaaagaagatgtatcagctaaagcagga
atgagtaaaatgaaaccaaagaaagagagcaagttaactccatgggttgagaaatacagg
cctcgttccatggatgaggtggtggaacaacacgagattgtagcagtgttaaaacagtgc
ttgaccggagcagatcttccccacttcttgttctatggacctccaggcactggtaaaacc
agtacaataattgctgccgctcgccagctatttggcgatatttacaaagagagaattctt
gaactcaacgcatctgacgatcgtggtatccaagtaataagagagaaggtgaaaaacttt
tctcaactgacagcaagttctgtacgcccagatggaagaccgtgtccaccgtacaagatt
gtcatccttgatgaagctgattccatgacaagtgcggcccaagctgcacttcggcgaact
atggaaaaagaaactcgttctacacgcttctgtctgatttgtaattatgtaagctgcatt
attcagccactcacttcacgttgtacaaaatttagatttaaacctttgggccaagagaag
atgttggataaattaaaggaaatatgtgatgcagaggatgtaaagtgtgagccggaagca
atgaagttacttgtagagatgtccggtggtgacatgagacgagccatcacctgtctacag
tcgtgttctcggctcaaagctggagatcaaataagcacaagtgatgtttttgaagtaaca
ggaatcgtgcccaatcactggattaagggattgatggaagtttgtgaaattaaggactac
cagaaactcgaagattacattgataaaatgatgatggaagcctattccgcttcacaaatt
ttagatcaggtacagaaaagtgttattgactctttggaattgactgatgtacagaaggcc
aatatttgtgaaaaaattgctgtatgcagctggagactacaggatggggctagtgagttc
ttacagttgatggacttgtgttacacgatcgtcaaggctcacaagtctgttacagtttaa
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integrated database retrieval system
