Homalodisca vitripennis (glassy-winged sharpshooter): 124352976
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Entry
124352976 CDS
T09217
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124352976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvi03021
]
124352976
03036 Chromosome and associated proteins [BR:
hvi03036
]
124352976
Transcription machinery [BR:
hvi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124352976
Chromosome and associated proteins [BR:
hvi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124352976
PBAF complex
124352976
GBAF(ncBAF) complex
124352976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
SCHIP-1_C
BRCT_2
Motif
Other DBs
NCBI-GeneID:
124352976
NCBI-ProteinID:
XP_046658693
LinkDB
All DBs
Position
1:complement(194159557..194196894)
Genome browser
AA seq
962 aa
AA seq
DB search
MLALGPKKDGGPNIKFFESPETISLFDGIKSWLQKNCKKYVQTDPPTSKGLAQLVIQLIQ
FQEDNLGKNVSKPPLTRLPMRCFLDMKPGGALCHLLATVYKFKSEQGWRRFDFQVSKSPS
RMDRNVEMFMNVEKALVQNKCLTMPIAYIRPDVDKANASRVRDIIKRHQGTVTENETEAT
HIIYPVCDPLDEEYARPSLKRDRMVLMHWYYFPDSHDSWISADLPLDPPDSPQPHTTPWR
VSASWALDLDQYNEWMNEEDYEMDESGRKKVHKLRLSVEDLMSQGDPDKSKKKQKRKRSP
SPPPLKGKRKSGRSPAVGTKKSKSDDADDEGDDLTKDMAEPVPEPNITEVPVPKPGVSLS
KKDIDTQPIKSGTMTDLDEEGEKNEDSQPVKTPDPQSSQEGVIKEKDKEKEDGVEDNVTE
QTHHIIIPSYSAWFDYNSIHTIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTE
YITSTASRRNLAGDVCAIMRVHAFLEQWGLINYQVDADSRPTPMGPPPTSHFHVLSDTPS
GLQPVNPPKTPQPSAAKTLLDMDKKLDGTPKKADSDLGMNFGLKLDQYARKPAVLRNKTA
ANLTRDWTEQETLLLLEALELYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDHEA
GGALGPLAYQPIPFSKAGNPIMSTVAFLASVVDPRVAASAAKAAMEEFANIKDEVPAALM
DAHIKNVEASTTDGKFDPAAGLVQSGIAGTVPEKDEEAEKEKKEGEPSKEGEDPKQNGEE
SAPDASAIVKKEVEKPAEPAPEPMEEDKKEEEGVEVAKEETEREKLVKDAQLQAAAAAAL
AAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEKEREGLEYQRQQ
LIQERQQFHLEQLKAAEFRARQQAHQRLAAEQQQTPSTTPTPPSPQAVPTPHPAATSPSP
NQ
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgttggcacttggacccaaaaaagatggtggaccaaatatcaaattctttgaatcgcct
gaaacaatttcattgtttgatgggatcaaatcgtggcttcaaaagaattgtaaaaagtat
gtccaaactgatcctccgaccagcaaaggtttggcacaacttgtgatccagctcatacag
ttccaagaagacaatcttggtaaaaatgtcagcaaaccccctcttacacgcttaccaatg
cgttgtttcctggacatgaagccaggaggggctctatgccacctattggctacggtatat
aaattcaagagtgaacagggttggcggagattcgatttccaggttagtaagagtccctct
cggatggaccggaacgtggagatgttcatgaatgtagagaaggccttggtgcagaataaa
tgtctgacaatgcctattgcctacatcaggccagatgtggacaaggcgaatgcttcacgg
gtcagagacatcattaagagacaccaaggaacagtcaccgagaacgaaacagaggccacc
cacatcatctacccagtgtgtgatcccctagacgaggagtatgccaggccctccctcaag
cgtgaccggatggtgctcatgcactggtattacttcccggactcccatgactcgtggata
tctgcagacctgcctttggacccgcccgacagcccgcaaccccacacaactccttggcgg
gtgtcagcgtcatgggccctggatctggatcagtataatgagtggatgaatgaagaggat
tacgaaatggatgaaagtgggagaaaaaaagtgcacaagctccgtttgtctgtcgaagat
ctgatgagtcaaggtgaccctgataaatctaagaagaaacagaagagaaaacgttcccct
tctccacctcctctaaaagggaagagaaaaagtggccgcagtccagctgtgggcaccaag
aagtcaaagtcagatgatgccgacgatgagggtgatgacttgaccaaggatatggcggag
cctgtgccagaaccaaacatcactgaggttcctgtccctaaacctggagtatcactctcg
aaaaaagacatagacacacagccgatcaagagtggtacgatgactgatttggacgaagaa
ggcgaaaagaatgaggacagtcagccggtgaagaccccagacccacagagctctcaggag
ggagtgataaaggagaaggataaagagaaagaggatggtgtggaagacaatgtcacagaa
cagacccaccacattatcatccccagctactcggcctggtttgactacaattccatccac
acaatagaaaagagggcattgcctgagtttttcaacggcaaaaacaagagcaagacacca
gaaatctacttggcataccggaacttcatgatagatacctacagactcaaccccactgag
tacataacaagtacagcgtcacgcagaaacttggctggtgatgtatgtgctatcatgagg
gtacacgctttcctggagcagtgggggcttattaactatcaggtggatgccgacagcaga
cctaccccaatgggtccaccccccacctctcacttccacgtgttatcagacacaccgtct
ggactgcagcctgtcaatcctcccaagacccctcaaccctctgctgccaagacgctcctg
gacatggacaagaaactggacggtactcctaagaaagcagacagtgatttgggcatgaat
tttggcctcaaattggatcaatatgctcgtaagccggcggtactacgcaacaagacagcg
gccaatctgacgcgtgattggactgaacaggagaccttgctgttgctggaggccttggaa
ctgtacaaggatgattggaacaaggtttgcgaacacgtgggctcacgcacacaggacgag
tgtatcttacacttcctacggctgccgatcgaggacccttacctagaggaccatgaggct
ggtggtgcactgggtcctcttgcataccagcctatccccttcagcaaagctggtaaccct
attatgtctactgtggcatttttggcttccgtagtcgacccccgagtagctgccagtgcc
gccaaggctgccatggaggagtttgccaacattaaggatgaagttccagcagctctcatg
gatgctcacataaaaaatgtagaagcttctactactgatggcaaattcgatccagcagca
ggtcttgtgcagagtggtatagcgggaacagttccagaaaaagatgaggaagcggagaaa
gagaagaaggaaggggagccatccaaagaaggagaagacccaaaacagaacggtgaagaa
tcagctcctgatgcttctgctattgtgaaaaaagaggttgagaaaccagcagagccggca
ccagagccaatggaggaggacaaaaaggaggaagaaggtgtagaggtagcgaaggaggaa
acagagagggagaagttggtgaaggatgcacagcttcaagcggctgctgcggcagctcta
gcagcagcagcagtgaaggcaaaacaccttgctgctgtggaggagcgaaaaataaaatca
ctggttgcgctactggtggagacacaaatgaagaaattggaaatcaaactgaggcacttt
gaggagttggagacgacgatggagaaggaaagagaaggtttggagtaccagagacaacag
ctgatacaggagaggcagcagttccatcttgagcagctgaaagctgcagagttccgtgca
aggcagcaggctcaccagcgactggctgcagaacaacaacagaccccttctacaactccc
acacctccctcaccgcaagcagtacccaccccacatcctgcagccacctcaccctctccc
aaccagtag
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