Homalodisca vitripennis (glassy-winged sharpshooter): 124353118
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Entry
124353118 CDS
T09217
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hvi03009
]
124353118
Enzymes [BR:
hvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124353118
Ribosome biogenesis [BR:
hvi03009
]
Eukaryotic type
Pre-60S particles
Helicases
124353118
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_11
Helicase_RecD
AAA_22
Phage_YunG-like
Motif
Other DBs
NCBI-GeneID:
124353118
NCBI-ProteinID:
XP_046658915
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All DBs
Position
1:complement(227090369..227157163)
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AA seq
557 aa
AA seq
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MEEDNPSKRMKESGNIQFHEMELDDRILKALAKLGWQNPTLIQEKAIPLLLDGKDVLVRA
RTGSGKTGAFAIPVIQKILTNKHVAKEQAVKALILAPSKELCNQIHSHVLELTQKCSREV
RCIDISPQMDIEAQRPLLIERPDIVVATPARALLHLTAKSLSLKNSLEMLIIDEADLMFS
FGYEDDVREVLKFLPRVYQATLASATLSEDVLSLKKLILHNPVTLKLQESELAPVTQLEH
YIINAEEQDKAAILYAFLMLRLIRGKTIIFVNTVDRCYKLKLFLEQFAIKTCLLNSELPA
NVRCHAVTQFNQGVYDIIIASDENALEKTQSNTAPADPKQKGKRKRDKESGVARGIDFQQ
VSNVINFDFPLDLSSYIHRAGRTARGNNQGTALSFVSVRERPMMELVEEHLKNDLSHTGS
IFKTYQFNLEEVEGFRYRAKDAWRSVTRIAVREARLKEIKEEMLNNDRLKGFFEENSTDF
KALRHDRALHTVKFQPHLAHVPDYLVPSSLKKLDIPGVKTTPKNRSGSYMRRKYKVRQKN
PLQTMEFEGFRGKSDKK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagataatccaagtaaaagaatgaaggagagtggaaatatacagtttcatgaa
atggaattagatgacaggattttaaaggcactagctaaacttggatggcagaatccaact
ctgattcaagaaaaggcaatcccattgttattggatggtaaagatgtcctggtccgtgct
cgcactggatctgggaaaactggtgcatttgcgatacccgttatacaaaagatcctgacc
aataagcatgttgcaaaagagcaagctgtaaaagcgttaattttggctccaagcaaagag
ttgtgcaaccagatccattctcatgtattggaactgacacagaagtgttcaagagaagtc
aggtgcatagacatctctccgcagatggatatagaagcccagcgtccgttgctgatcgag
agaccagatattgtggtggctacaccagcccgagccctactgcaccttacagctaagtcc
ttgtcgctcaagaactctctggagatgctcatcatcgatgaggcagatctcatgttttcc
ttcggctatgaggacgatgtcagagaagtcttaaagttcctgccacgagtgtatcaggcc
accctagccagtgccacactcagcgaggacgtcctgtctctcaagaaactgattctgcac
aatccggtgacgttgaagctgcaggagtcggagctggcgcctgtcactcagttggaacat
tacatcattaatgccgaggagcaggacaaagccgccatcctgtacgcattcctcatgctg
cggctcatacgcggcaagaccatcatcttcgtcaacaccgtcgacaggtgttacaagctc
aagctattcctggagcaatttgctatcaagacatgtttgctgaactcggaattgccagcc
aacgtgcgctgtcacgcggtgacgcagtttaaccaaggtgtttacgacatcatcattgca
tccgacgagaacgccctggagaaaacacaatccaacactgcaccggcagacccaaaacag
aaagggaagaggaaacgagataaagagtccggagtagcgagaggtatcgacttccagcaa
gtgtcaaatgttatcaatttcgattttccacttgatttaagctcttacatccacagagca
ggccgcacagccaggggtaacaaccagggaacagcactctcctttgtcagcgtgagggag
agacctatgatggaattagttgaagagcatttgaaaaatgatctttcacatactggttcc
attttcaaaacataccagtttaacctggaagaagtggaaggcttcagatatcgtgctaaa
gacgcgtggagatctgtcacaagaattgcggttcgagaagccaggcttaaagaaatcaaa
gaagaaatgttaaacaatgacaggctaaagggcttcttcgaagagaattccacggacttt
aaagcgctgaggcatgacagagctctacatacggtgaagttccagccacacctggcccac
gtacctgactatctcgtgccttcttcactcaagaaactggatatccctggcgttaagacc
acacctaagaaccgtagtggatcttatatgaggagaaagtacaaggtgagacagaagaat
cctctgcaaaccatggaatttgagggatttagaggaaaatcagataaaaaataa
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