Homalodisca vitripennis (glassy-winged sharpshooter): 124353856
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Entry
124353856 CDS
T09217
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124353856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvi03041
]
124353856
03009 Ribosome biogenesis [BR:
hvi03009
]
124353856
Enzymes [BR:
hvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124353856
Spliceosome [BR:
hvi03041
]
Complex A
U1 snRNP components
U1 related factors
124353856
Complex B
124353856
Ribosome biogenesis [BR:
hvi03009
]
Eukaryotic type
Pre-60S particles
Helicases
124353856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
124353856
NCBI-ProteinID:
XP_046659839
EnsemblRapid:
LOC124353856
LinkDB
All DBs
Position
2:43488644..43515558
Genome browser
AA seq
578 aa
AA seq
DB search
MYRDRGMNRPRGRGMSGGFRDDRRGGPRLGRGGGFKSKQPGSQLRPQRWDNLPPFRKDFY
TPHNNVSSRSQHDVMNFRSRYEMTIRGNNVPHPVEDFEEANFPPYVMDNIRRQGFLTPTP
IQSQGWPIALSGNDMVGIAKTGSGKTLAYILPAIVHINNQPPVNYGDGPVVLILVPTREL
AQQIQQVAADFGSSTRVRNTCIYGGAPKGPQARDLEQGVEIVIATPGRLIDFLERGQTNL
RRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRALAEDFLIDYIQ
LNIGSLTLAANHNILQIVEVCQEHEKEYKLRRLLQEIGSEKENKTIIFVETKRKVDEITR
CIRRDGWPALSIHGDKNQVERDHVLQEFRSGRSPILVATDVAARGLDVEDVKFVINFDYP
SSSEDYIHRIGRTGRSEQTGTAYAFFTPHNAKHATELVNVLTEANQSINPKLAEMATMAK
YGLPKSFGAGGGARINRRGRGGESRGRGGENRGGSRGRGVDRGRPGNRWDVPSSRGGGGG
SSYNGFNNGTSRGFQQGNFNFNQPPPPPPSHPYPGAGY
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtgatagaggaatgaaccgtccacgtggaagaggcatgtctggaggatttagg
gatgatcggagaggaggacccagattagggagagggggtggcttcaaaagcaaacagccg
gggtcccagttacgcccccaaaggtgggacaatcttcctccattccggaaagacttctac
actccacacaacaatgtgtcaagcaggtctcaacatgacgtgatgaactttcgctcaaga
tatgagatgacaatccgaggaaacaatgtgccacatcccgttgaagactttgaagaagca
aactttcctccttatgtaatggataatatcaggaggcaaggattcttgacgccaactcca
atacagtctcaaggctggccaatagctctcagtggcaatgatatggtcggcattgccaaa
actggctcaggaaaaacacttgcgtacattctgccagctattgtccacatcaacaaccag
ccccctgtgaactatggggacggtccagtggtgctgatactggtgccaacccgagagctt
gcacagcagatacagcaggttgccgctgattttggctcctcgacgcgtgtccgcaacacc
tgtatttatggtggagcacccaagggacctcaggcacgcgaccttgagcagggggtggag
attgtgatagcaacaccaggccggctgatagacttcctggagcgtggccaaacaaacttg
cgacgttgcacctacctggtactggatgaggccgacagaatgttagatatgggcttcgag
ccacagatacgcaaaatcatcgagcagatcaggcctgacaggcaagtactgatgtggtcg
gcgacgtggcccaaggaagtgcgagcactggcggaggacttcctgattgactacatccag
ctgaacattggctccctgacgctagcagccaaccataatatcctgcagatcgtcgaagtc
tgtcaggaacacgagaaggaatacaagctgaggagactgttgcaagaaattggatcagaa
aaggaaaataaaacaattatatttgtggagacaaagcgtaaagttgatgaaattacccgt
tgtattaggagagatgggtggccagctctgagcatacatggggacaaaaaccaagtggaa
cgagatcacgttctccaagagttccgcagtggaagatcaccaattttagtagcaactgat
gtggctgccaggggtctagacgttgaagatgtgaaatttgtgatcaactttgactaccca
tcatcatcagaggactacatacaccgcatcgggcggactggccgctcggaacagaccggc
actgcgtatgcattcttcaccccacacaatgccaaacacgccactgagctagtcaatgtt
ctcacggaggctaaccagagtatcaaccccaaactggcagagatggccaccatggctaag
tacggccttccaaagagttttggtgctggaggaggggcacgaatcaaccgtcgtggaaga
ggaggggagagcaggggcaggggaggtgaaaataggggtggctcaaggggaagaggagtg
gaccgaggacgaccaggcaatcgctgggacgttcccagcagtcgaggtggtggtggtggc
agcagctacaatggtttcaacaacggaacatcacgtggtttccaacaggggaattttaac
ttcaaccagcctccaccccctcctccctcccatccatatcctggggcgggatactaa
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