Homalodisca vitripennis (glassy-winged sharpshooter): 124354087
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Entry
124354087 CDS
T09217
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124354087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvi03041
]
124354087
03009 Ribosome biogenesis [BR:
hvi03009
]
124354087
Enzymes [BR:
hvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124354087
Spliceosome [BR:
hvi03041
]
Complex A
U1 snRNP components
U1 related factors
124354087
Complex B
124354087
Ribosome biogenesis [BR:
hvi03009
]
Eukaryotic type
Pre-60S particles
Helicases
124354087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF2608
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
124354087
NCBI-ProteinID:
XP_046660247
EnsemblRapid:
LOC124354087
LinkDB
All DBs
Position
2:67652678..67706362
Genome browser
AA seq
780 aa
AA seq
DB search
MFRDSGGRQGGRGGGRGGGRGGASRGGGRGGGSRTGGDSSFRGRGGGGGGRDSWSSSRGG
SRSMKGDMPGQNLRKPRWDMNSLEPFRKDFYVASPTVANRPPAEVARFRESMEITTHGDG
IPNPICHFEEVNFPDYVMDEIRKQGFGQPTAIQSQGWPIALSGRDMVGIAQTGSGKTLAY
ILPAIVHINYQPRLLRGDGPIALVLAPTRELAQQIQQVATDFGSSTYVRNTCVFGGAPKG
PQARDLERGVEIVIATPGRLIDFLERGQTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQ
IRPDRQVLMWSATWPKEVRNLAEEFLNNYLQINIGSLQLAANHNIHQIVEVCDDVEKPDM
LLKLLSDISQEPDNKAIIFVETKRGVDEITRAVQRNGFNAMAIHGDKSQQDRDYVLADFR
SGRTNILVATDVAARGLDVDDVKFVINYDYPQSSEDYVHRIGRTGRSSKTGTSYTFFTPS
NAKQASDLISVLQEAGQEVSGMLYQLAEMARSGAFGKGGRNRFRMDRNYDSGGGRKERGF
SRGSRGGSRGGRDGGRFTGGGSGGRYSGNERSTNDWNSGNDNRGRFGGGRGVDDGNRFSA
GRGDNEGNGFGRGNDDNNRFSGGRGTDGGRFGGRFGGRGGDRGGRFGGERGGRGGGIGGN
SNEDSSASYMGGGRGGAFNNERGRGRGMGDRGRGRPKRESRWGEETDEQKATRSRRNAEN
RGSGPNADDGGARPAPLLGNFNAPPPGYNQQGMPMNFGQQFQQQPMNGFGFQNQIGISRN
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgagactcaggtggtcggcagggaggacgtggtggcggcaggggcggtggccgg
ggtggtgccagtagaggaggaggccgtggtggtggcagcaggacgggtggggatagcagt
ttcagggggagaggaggtggtggcgggggacgggacagctggagcagcagtagaggtgga
agcaggagtatgaagggagatatgccaggacaaaacctaaggaagccgaggtgggacatg
aactcactggaacctttccgaaaagatttctatgttgcctctcccactgtcgctaataga
ccaccagctgaagttgccaggttccgagagtcaatggaaattacaactcatggagatgga
atacccaacccgatctgtcactttgaggaagtcaactttcctgactacgtcatggatgag
atcaggaaacagggttttggacaaccaacagccatccaatctcagggctggccaatcgct
ctcagtggtcgagacatggtcggcattgcacagactggatctggtaaaaccttggcgtat
attctaccagccatagtccacatcaattaccagccacgtctgttgcgtggtgatggtcca
atagcgttggtgctggctcccacaagagaattagctcaacaaatacaacaagttgccaca
gatttcggttcatccacgtatgtccgcaacacttgtgtatttggaggagcacccaaaggg
ccgcaagcccgagatctggagcgaggagtagagattgtgatagcgacaccaggccgtctt
atagacttcctggagcgtggccagactaacctacggcggtgcacctacctggtgctggac
gaggctgacaggatgctggacatgggcttcgagccacaaatacgcaagatcatcgaacag
atcaggccggataggcaggtcctgatgtggtcggcaacatggcctaaggaagtgcggaac
cttgcagaggaattcctcaacaactacctacagataaacatcggctccctccagctggca
gccaatcacaacattcatcagattgtcgaagtctgcgatgatgttgagaagcctgacatg
ctgttgaaattgctgagcgacatctcacaagaacctgacaacaaagctatcatctttgtg
gaaacaaagcggggagtggacgagatcaccagggctgtacagagaaatggatttaacgcc
atggctattcacggagacaaatcccaacaagacagagattacgtactggccgattttcgg
tcaggaaggactaacattctggttgcaacagacgtagcagcaagagggcttgacgtggac
gacgtgaagtttgtgatcaattacgactacccacagtcatcggaggactacgtacaccgg
atcgggcgtacaggtcggtcaagcaagaccggtacctcttatactttcttcacaccgagt
aacgcaaagcaggcatctgacctcatcagtgtgctacaggaggcagggcaggaggtcagc
gggatgctgtaccagttggcagagatggcgaggagtggtgcattcggcaagggcggtagg
aaccgttttagaatggaccgcaactatgatagtggaggtggccgcaaggaacgaggcttc
agcagaggttcacggggaggatcaaggggaggacgtgatgggggacggtttactggtgga
ggtagtggggggcgttatagtggaaatgagcgatcaactaatgactggaattctggaaat
gataatagaggtagattcggaggaggcagaggggttgatgacggaaatcgattcagtgca
ggaagaggagataacgaaggaaatggatttggtagaggaaacgatgacaataatagattt
agtggtgggcgaggcactgacggaggaagatttggagggagatttggtggaagaggaggt
gataggggtggaagatttggaggtgagagaggaggtagaggtgggggcattggtggaaat
tccaatgaggatagcagtgccagttatatggggggaggaagaggaggggccttcaataac
gaaagaggaagaggtcgtgggatgggagacagaggccgaggacgacccaaacgtgaaagc
agatggggggaagagacagacgaacagaaggcaactagaagtcggaggaatgctgagaat
cgtggatcgggcccaaatgcagatgatggtggtgctcgacccgctcctctcttggggaac
ttcaatgccccacctccaggctacaaccaacaaggcatgcccatgaattttggacagcag
tttcaacaacagcccatgaatggctttgggtttcaaaaccaaataggcataagccgcaac
taa
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