Homalodisca vitripennis (glassy-winged sharpshooter): 124354104
Help
Entry
124354104 CDS
T09217
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124354104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvi03021
]
124354104
03041 Spliceosome [BR:
hvi03041
]
124354104
03036 Chromosome and associated proteins [BR:
hvi03036
]
124354104
Transcription machinery [BR:
hvi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
124354104
Spliceosome [BR:
hvi03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
124354104
Complex B
124354104
Complex C
U2 SnRNP specific factors
124354104
Chromosome and associated proteins [BR:
hvi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
124354104
TFTC complex
124354104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
124354104
NCBI-ProteinID:
XP_046660275
LinkDB
All DBs
Position
2:68513731..68586116
Genome browser
AA seq
1212 aa
AA seq
DB search
MYLYNLTLQRATGITHAVHGNFSGSKTQEVLVSRGKCLELLRPDPNTGKVHTLLTVEIFG
IVRSLMAFRLTGGNKDYIVVGSDSGRIVILEYVPTKNILEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFENP
LFACLEIDYEEADTDVTGEAVHKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLEIDEDMVTEIKLKYFDTVPVATAMCVMKTGFLFVAAEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLKNLVLVDEMDSLSPILACQVADLANEDT
PQLYMACGRGPRSSIRVLRHGLEVSEMAVSELPGNPNAVWTVKKRVDDEYDAYIIVSFVN
ATLVLSIGETVEEVADSGFLGITPTLSCSALGDDAAVQVYPNGVRHIRSDKRLQDWKVTG
KKQIVKCAVNQRQVVIALTGGELVYFEMDATGELKEYDTHKEMASDVVCMALGNAPSGEQ
MSRFLAVGLADNTVRIISLDPDDGLSPLSMQALPAAAESLCIVEMGAGEDDSARGTLYLN
IGLTNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRIKMQGNQAVLAMSSRSWLSYSYQ
NRFHLTPLSYESLEFASGFSSEQCPEGIVAISSNTLRILALEKLGAVFNQVSFPVEYTPR
KFIVHPESSNLIILETEHNAYTEETKRQRRIQMAEEMQEAAGEEEEELAKEMAQAFLNED
LPERVFSAPKAGAGMWASLLRLLDPVEGKTHLILRLEQNLAAVSVALVKFANQPETQQFL
VVGVAKDLQLNPRQVGCGYIYTYKVDSSCTSLELVHKTQVDEVPTAICGFQGRLLVGVGR
MLRLYDMGKKKLLRKCENKHIPNLIVDIRAMGHRIFVSDVQESVYMVRYKRAENQLIIFA
DDTQPRWITTTCVLDYNTVACADKFGNISVIRLSQNISDDVDEDPTGNKALWDRGLLNGA
SQKADFIANFHIGEVCMSLQKATLIPGGSESLVYTTLSGTVGVLVPFTSHEDQDFFQHLE
MHMRSENAPLCGRDHLSFRSYYYPLKNVLDGDLCEQYNAIDASKQKSIAEDLDRTSSEVS
KKLEDIRTRYAF
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgtacaatttgacactccaaagggctactggcattacccatgcagtccacggg
aacttctcaggtagcaagacgcaggaggtgttggtgtctcgaggaaagtgtttggaacta
ttgcggcctgatcccaacactggcaaagtacacacactgctcaccgtcgagatattcgga
attgtccggtccctcatggcattccggcttactggcggcaataaggactacatagtggtc
gggtcggattctggtcggatcgtgatcctggagtatgttcctaccaagaacatcctggaa
aaggtccaccaggagacgtttggcaagagcggatgtcgtcgcattgtccctggccagtac
ctggccatcgaccccaaaggcagagctgtcatgatcggtgcgatagaaaaacagaagctg
gtctacatcttgaacagggatgctgaggctagactgactatctcctcacctctggaggct
cacaagagtaacacccttgtgtaccatatggttggagtggatgttggttttgagaatccc
ctctttgcttgtcttgagatagattatgaggaggcagacacggatgtcactggtgaggct
gtacacaagactcagcaaaccctaacattctacgagctggacttagggttgaaccacgtg
gtgcgcaagtactctgagccattggaggagcatgctaacttcttagtgtctgtaccaggc
ggcaacgatggccccagtggtgtacttatctgctcggagaactacctgacgtacaagaac
cttggggatcagcacgacatccggtgtcctattcctcgaaggaggaatgatttggatgat
cctgaacgaggtatgatttttgtctgctcagcgacccacaagaccaagtccatgttcttc
ttcttggcccaaacagagcaaggggacattttcaaggtgactttggagatagacgaagat
atggtaacagagatcaaactcaaatactttgacactgtacctgttgcgactgccatgtgc
gtgatgaagacaggatttctgttcgtggctgcggaatttggcaatcactacctataccag
attgctcatcttggagatgatgatgatgaacccgagttcagctccgccatgcctctggag
gagggagacacattcttttttgctccaaggcctctcaagaatctggttttggttgatgaa
atggactcgctttcacctattttagcatgccaggtcgctgatttagctaatgaggacaca
ccgcagctgtacatggcgtgtggccggggaccccgctcctctatacgtgttctgcgccat
ggtctggaggtttcagagatggctgtctccgagttacctggcaaccccaacgctgtgtgg
accgtcaagaaacgagtcgatgatgagtatgatgcatacatcattgtatctttcgtcaat
gccaccctggtgttgtctattggtgagactgtggaagaagtggcggattctggattcctc
gggatcacccccacactgtcctgctctgcgcttggcgacgatgctgcggtccaggtgtac
ccaaacggtgtaagacacatccggtctgacaagcgactacaggattggaaggtcacaggc
aagaagcagatagtcaagtgtgcggtaaaccagcggcaagtggtaatagccctcactggt
ggcgagttggtttacttcgagatggatgctacgggagagcttaaggagtatgatacacac
aaggagatggctagtgatgtggtctgtatggcactggggaatgctccctctggggagcag
atgtctcggttcctagccgtgggtctggcggacaacacagtgcgcatcatctccctggac
cctgatgatggattgtctccacttagcatgcaagcactgccagcggctgcggaatcacta
tgcattgttgagatgggagccggtgaggacgacagtgcacgcggtactctctacctcaac
attggtctcaccaatggtgtgctgctgcgtacagttcttgatccggttactggagacctt
agtgatacccggacccggtatctgggctcacggcctgttaaactcttccgcatcaagatg
caaggcaaccaagcggtgttagccatgtccagcagatcctggctaagttacagctatcag
aaccggttccacctgacacctctgtcgtacgagtcgctagagtttgcatcaggtttctcc
tcagagcaatgccctgagggtattgtcgccatctcttcaaatacattgagaattcttgct
ttagagaaactgggagccgttttcaaccaggtatcatttccagtggaatatactcctcgt
aagtttattgtgcatccagagtcgtctaacttgattatcctggagacggagcacaacgcc
tatacagaggagacaaagagacaaaggagaatccagatggcagaggagatgcaggaggct
gctggggaggaggaggaggagctggccaaggagatggctcaggcattcctcaacgaggat
ctaccagagagagtgttctctgcacccaaggcgggggctgggatgtgggccagtctgctg
cggctgctagatccggtggaaggcaagactcacctcatcctgcgacttgagcagaacttg
gccgctgtcagtgttgccctcgtcaagtttgccaaccagccagaaacccagcagtttctg
gtagtcggtgttgcgaaggacctgcagctaaaccccaggcaggtcggctgtggctacatc
tacacctacaaggtagactcgtcttgcacctcgctggagctagtacacaagacgcaagta
gacgaggttccaacagcaatttgtggcttccagggccgtctgcttgtgggtgtcggccgc
atgctgcgactgtacgacatgggcaagaagaaacttctgcgcaagtgtgagaacaagcac
attccaaacctgattgtggatataagggcgatgggtcatcgtatctttgtgagtgacgta
caggagagtgtgtatatggtgaggtacaagcgggcagagaaccagttgatcatcttcgca
gacgacactcagccacgttggatcaccaccacctgcgtgctcgactacaacactgttgca
tgcgcagataaatttggcaacatttctgtgatccgactatcacagaacatatcagatgat
gttgatgaggaccccactggcaacaaggccttgtgggacagaggtttgctgaatggagca
tcccaaaaggcagatttcattgccaattttcacattggagaggtctgcatgtcactacag
aaagctacactgatccctgggggctcagagtcactggtgtatactacactttcgggcaca
gttggtgtgttggtgccttttacttctcacgaggatcaggacttcttccagcatctcgag
atgcacatgcgctctgagaatgctccactttgtggccgtgaccatctctccttccgatca
tactactatccactgaagaatgtactggatggtgacttgtgtgaacagtacaacgcaata
gatgcttctaaacagaaaagtatagctgaggatcttgacaggacctccagtgaagtgtct
aagaaactagaagatattcgtactagatacgctttctaa
DBGET
integrated database retrieval system
