Homalodisca vitripennis (glassy-winged sharpshooter): 124354300
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Entry
124354300 CDS
T09217
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B
KO
K03253
translation initiation factor 3 subunit B
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvi03019
]
124354300
03012 Translation factors [BR:
hvi03012
]
124354300
Messenger RNA biogenesis [BR:
hvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
124354300
Translation factors [BR:
hvi03012
]
Eukaryotic type
Initiation factors
eIF-3
124354300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
WD40_WDHD1_1st
RRM_1
WD40
Beta-prop_ELP1_1st
Beta-prop_WDR35_TULP_N
WD40_CDC20-Fz
RRM_Nup35
Syntaxin
Beta-prop_CAF1B_HIR1
Nup35_RRM_2
DUF2153
DUF5869
Motif
Other DBs
NCBI-GeneID:
124354300
NCBI-ProteinID:
XP_046660601
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All DBs
Position
2:85267474..85317894
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AA seq
697 aa
AA seq
DB search
MAKKKDSDKSAQNDSKTAKTDPAEDEEPNFSDDERYVDDISDEELLSDLVKDRPNEKDGV
DTIIVVDGIPQVGPERFDKLQSVIMKFFTKFGTIINEYFPKNEAGHTKGYVFLEYANSEN
AVEAVNTANNHKLDKQHTFLVNLFTDFKKYEEIPDEWEPPQPQPYKEQSDLYSFLMDPDA
YDQFSVMCNRGSSVQIMQNTAPEPTKLQERLRWTETFIQWSPLGTYLATFHVKGIALWGG
PAFEQIMRFGHTGVQYIEFSPCERYLVTYSPSNENIDPKKMVIIWDIRTGLEKRSFSIDG
TMVWPIFRWSKDDKYFARIGTDTLSVYETPSFGLLDKKSFKLLGIRDFSWSPTDNILAYW
VAEDKDVPARVVLIEIPSRNEIRANNLFNVASCTMHWQKSGDYLCVKVDRFSKVKKEKGD
QPKYSGMYYNFEIFHMREKNIPKDSEEVKEPIHAFAWEPVGSKFAIIHGESPNICVSFYG
VKTGQTPTMLSKLEKRVCNNLFWSPMGQFIVLADLRANGILEFVDTNDFTVMNNTDHFQV
TDVEWDPTGRYVVTAVSYWKVKVDTGYWMWSFQGKIIKRNNVDGFCNFLWRPRPPTLLSA
EQQKEIKKNLKKYSPQFESKDRMRMTKASKELMEKRSKLMKDFEEIRNRQQEIWKSQKPR
RLELRNNVDTDELDSDIKNVEEEVVEFLVKEEVTIVE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaaaaggattccgacaaaagtgcccaaaatgacagcaagacagcgaaaacc
gacccagccgaagacgaagaacctaacttcagtgacgatgagagatatgttgatgatatt
tccgatgaagagttattgagtgatcttgtgaaagatcgtccaaatgagaaggatggtgtg
gatacaatcatagtagtcgatggtattcctcaggttggtcctgagcgttttgacaagctc
cagtctgtcataatgaagtttttcaccaagtttggtacaataatcaatgaatatttccca
aaaaatgaagccggccacactaaaggatatgtttttcttgagtatgccaactcagaaaat
gcagttgaagcagttaatacagccaacaatcataagcttgacaaacaacacactttttta
gttaacctcttcacggactttaaaaagtatgaagagatcccagatgaatgggagccaccg
cagccccagccatacaaggagcagtcagacttgtacagtttcctaatggatcctgatgct
tacgaccagttctctgtaatgtgtaaccgaggaagctctgtccaaatcatgcaaaataca
gctcctgagcccactaaactccaggaacgattgcgatggacagagacgttcatacagtgg
tcaccccttggtacatacctagctactttccatgtcaagggaattgccctctggggtggg
ccagcatttgagcagattatgaggtttggacacactggcgtgcagtatattgagttttca
ccctgtgaaagatacttggtgacgtactctcccagcaatgagaacattgatcccaaaaaa
atggtgatcatctgggacatccggacgggattggaaaagagatcattcagcattgacggc
accatggtgtggcccatcttccgttggtccaaggatgacaagtactttgcgcgtataggc
actgacacactaagtgtgtatgagacaccatcatttggtcttttggataagaagagcttc
aagctcttaggtatccgggacttcagctggtcacctacggataatatcctggcctactgg
gtggcagaagacaaggatgtgccagccagagtagttcttatcgagataccaagccgtaat
gagattagagccaacaacctgttcaacgtggcatcctgtacgatgcactggcagaaatct
ggggactacttgtgtgtcaaggtggatcggttcagtaaggtcaagaaggagaaaggagac
cagcccaaatacagtggaatgtattacaactttgagatttttcacatgagggagaagaac
atcccaaaggacagtgaggaagtgaaggagccaatccatgcttttgcttgggaaccagtc
ggcagcaagttcgccattatacatggcgagtcccccaacatatgcgtgtccttctatgga
gttaagactgggcagacacctaccatgctcagtaagttagaaaaacgagtgtgcaacaat
ctattctggtcaccgatgggacagtttatcgtgttggctgacctaagagccaatggcatc
ctggagtttgtcgacaccaacgatttcactgtaatgaacaacactgaccacttccaggtg
actgatgtggaatgggacccaacgggacgctacgtcgttactgctgtgtcttattggaaa
gtcaaggtggacactggatactggatgtggtcattccaagggaaaatcatcaagcgtaac
aatgtggacgggttctgcaacttcttgtggcgtccaagacctcccacccttctttcagcc
gagcaacagaaagagatcaagaaaaatttgaaaaagtacagcccacagtttgagagtaaa
gacaggatgcgaatgactaaagcttccaaggaattaatggagaaacgaagcaagttaatg
aaggactttgaggaaatcagaaaccgccagcaggagatttggaaatctcaaaagccccgc
cgtcttgagcttcgtaacaatgtggacaccgatgagctcgattcagacattaaaaacgtt
gaagaggaggttgtagaatttcttgtcaaagaagaagtcactatcgtcgagtag
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