Homalodisca vitripennis (glassy-winged sharpshooter): 124354728
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Entry
124354728 CDS
T09217
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvi03021
]
124354728
03036 Chromosome and associated proteins [BR:
hvi03036
]
124354728
Transcription machinery [BR:
hvi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
124354728
Chromosome and associated proteins [BR:
hvi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
124354728
SLIK complex
124354728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
HTH_Hrp3
CHD1-like_C
Helicase_C
Chromo
ResIII
HDA2-3
DEAD
DUF2147
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
124354728
NCBI-ProteinID:
XP_046661341
LinkDB
All DBs
Position
2:128811983..128889154
Genome browser
AA seq
1748 aa
AA seq
DB search
MHQEGSDEESGSGSDRNATSDKDKSDDNESKSGSDAESGKSDGEESNKSDKESNKSDVES
NKSDAESNKSDAESNKSGGESNKSGAESKKSKGSSSGSESDSGSSSDNDGSSKSKSGSGS
ESESKSTTTNSSPSKTNQKYVKAWEENPDVYGIRRSGRSRKEPERLKVAESDSSDKGRRK
STSKKSPSKTWNSDSTDYDSSTDRDVPPPRSKPPSRRTARSQPKKRPSPKKATSNKRRSY
SSSEESNYSSDDDKSKRSKSRRGATVSYKEDSEDKTDSDDLVDVEYAEPDPAAVDNAETI
ERVLAQRRGKKGVVGNITTMYAMEENGDPNADCDPNDLENTEKQYLIKWKGWSHIHNTWE
SEQSLKDQKAKGIRKLENFIRKEEDIEYWKKLTTPEDIEYYECQLELTQELLKSYNRVER
IIGISKDHAEYYIKWESLPYSEATWEDAGLIERKWPKKIKEFRDREDSKRTPSKLTKALK
SRPKFIKINEQPEYMGGQEVLTLRDYQISGLNWLVHSWCKENSAILADEMGLGKTIQTIC
MLYYLFHTHQVYGPFLVVVPLSTMTSWQRELSLWAPEMNVVTYIGDVTSRNIIRDHEWMF
ATSKRLKFNVVLTTYEIVLKDKAFLGSLGWAVLMVDEAHRLKNDDSLLYKTLREFDTNHR
LLITGTPLQNSLKELWALLHFIMPQKFNNWEEFEKEHDHAAAKGYAKLHKQLEPFILRRV
KKDVEKSLPAKVEQILRVEMTSIQKQYYKWILTKNYNALRKGNKGSPGVFVNIVMELKKC
CNHASLTKPMEFEGRVSTDDHIQQLIRGSGKLVLLDKLLVRLRETGHRVLIFSQMVIMLD
ILAEYLQMRHFPFQRLDGRIKGELRKQALDHFNAENSPDFCFLLSTRAGGLGINLATADT
VVIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKSSVEEDIIERAKKKMVLDHLVIQ
RMDTTGRTVLDKKSGSNNTPFNKEELTAILKFGAEELFKDEENADEEPTCDIDEILRRAE
TAEDAPATAGDELLSAFKVASFAAFEEDQNTQSEQEPEEETRDWDEIIPMDYRQKVEEEE
KAKEMEDLYLPPRSRKTLQQINQSESDGEGSGRGKKRKKRTDSESGSEEGSDEERPKKRG
RPRQANKEIIKGFTEAEIRRFVKSYKKFPAPMKRLEAIACDAELQEKPLAELRKLGDMLR
ERCQASVGEQQAQKENENEDSNLSGPPGKRRGRGPSIKFGGVSVNPKTLLAIEKELEPLD
MELPPDPEERSKWTMTYPTKAANYDVEWGAVEDSALLRGVYQYGLGSWEAIKMDPSLGIS
EKILANDDKKPQAKHLDMRAQYLLKILRKRSGGADAKKPQKRKPRATTKVDPPMKKPVSK
EIIEDDSSGAEEKPVVPTASTATTVTETNHTKETPPKVKVEESDVDKHKPDKKKKDVIPK
KKRKKGSDGPMHFTANSEPRALDVLGDLDPSIFNKCKDLMRPVKKALKALDNPDQSLSEQ
EQLQTTRGHLVQIGDQINKCLTQYKDPDHIKEWRSHLWDFVSKFTEYDAKKLFKLYKHAA
KKVKPEKEVEEKNKSSENKESSDHKKHHKKKTEEEKSNSEGQNSSSKKTSTLPPIPRNSD
KDERKVGEKDRPKDKEKGEKRPKLEAGGTPQVQRNSGGFRPGSGDARPPGPVNSPHSRPT
DGAGDRWNANRYGTDHKRDRDRFEPYQRMQGPGSGYNRERDRNRRPHDKSRFHQGMNPGY
GEPLRSWI
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaggaggggtcagatgaggaatcaggatcgggatcagacaggaacgcaacatct
gacaaggataagagtgatgacaatgagtcaaagagtggcagtgatgccgaatcgggcaag
agtgatggagaagaatcaaacaaaagtgacaaagagtccaacaagagcgatgttgagtcc
aataaaagtgatgcagaatccaacaagagtgatgctgaatccaacaagagtggtggtgaa
tctaataagagcggtgcagaatcaaagaaaagtaaaggttcctcatctggatcagaaagt
gattctggatcaagctcagataatgatggttcttcaaaatccaagagtgggagtggcagt
gagtccgaaagcaagtcaacaaccaccaactctagtccatcaaaaaccaaccagaaatat
gttaaggcttgggaagagaatcctgatgtgtatggtattaggagatcaggacgtagtagg
aaagaaccagaacgtctgaaggtcgctgagagtgacagtagcgataaaggcagaagaaaa
tctacctccaaaaaatcaccgagcaagacgtggaactcagactctactgattatgacagc
tcgactgatagagatgtgccacctccaagaagtaaacctcccagcagacgaactgccaga
tctcaacccaaaaagcgaccatcccccaagaaagccacctccaacaaacggcgatcttac
tcgtcatctgaggaatcaaattactcttcagatgatgacaagtcaaagagatccaaatca
aggcggggggcgactgtcagctacaaggaggacagtgaggacaagacagactctgatgac
ctcgtggatgtagagtacgctgagcctgaccccgctgcagttgacaatgctgagactata
gaaagagttctggctcaacgtcgtggcaagaagggagtggtaggtaacataacaacaatg
tatgcaatggaagaaaatggagacccaaatgctgactgtgatcctaacgaccttgagaat
acggaaaaacaatacctcatcaagtggaaaggctggtcacacattcacaacacatgggag
tcagagcaatcacttaaagatcaaaaggccaaaggaataaggaagttggaaaatttcata
agaaaagaagaagacatagagtactggaaaaaactcacaactcctgaagacattgaatac
tatgagtgccagttggagttgacacaagagcttctgaaaagttacaacagggtggaaagg
attattggtatttccaaagatcatgcagagtactatatcaagtgggaatcgttaccatat
agtgaagcgacttgggaagatgctggcctcattgagaggaagtggccaaagaagattaaa
gaattcagggatagagaagactcaaagaggacaccttcaaaattgacaaaagcactgaaa
agtcgtccaaagttcatcaaaatcaacgagcaacctgagtatatgggtgggcaagaggtg
ttgacactgagagactaccaaattagcggtctaaactggctagtacattcgtggtgcaag
gagaattctgctattctagcagacgagatgggcctaggaaaaactatacagacgatttgt
atgctctactacctgttccacacacatcaggtatatgggccgtttctcgtggtggtacct
ctgtccaccatgacatcatggcaaagagagctatcactgtgggcacccgagatgaatgtg
gtcacttacattggagatgttacttctcgcaacattatccgagatcacgagtggatgttc
gcaacatccaagcggctcaagttcaacgtggtactgaccacgtacgagatcgtcctgaag
gacaaagcattcctgggtagcctagggtgggcagtgctgatggtagatgaggctcatcgg
ctcaagaatgatgactcgctgctgtacaagactctacgtgagtttgataccaatcatcgg
ctgctcatcaccggcactccgctacagaactctctcaaagagctgtgggcactgttgcac
ttcataatgcctcaaaaatttaataactgggaagagtttgagaaggaacatgatcatgca
gctgccaagggctatgccaaactacacaagcagctggaacctttcattttaagaagagtt
aaaaaagatgttgagaaatctcttcctgccaaggtggaacaaatccttcgggtcgagatg
acatccatacagaagcaatattacaagtggattctgacaaaaaactacaatgctctaagg
aagggcaacaaaggctcgcctggtgtctttgtcaacattgtaatggagttaaagaaatgt
tgtaatcatgcctcacttaccaagcctatggaattcgaggggagagtttcaactgatgat
cacatccagcaacttatccgaggctcaggcaagctggtgttgctggacaagttgttagta
cggctccgggagacaggtcaccgtgtgctaatcttctcacagatggttatcatgttggac
atactggctgagtaccttcagatgcgacacttcccgtttcaacgactggatggcaggatt
aaaggagagctccgaaaacaagcgttggaccacttcaatgcagagaactctccagatttc
tgtttcttgctatctacacgtgctggtggtcttggtatcaatctagcaactgcagacact
gtagtcatcttcgactcagactggaatcctcaaaacgatctacaggctcaggccagagca
catcgaattggtcaaaaaaatcaggttaatatctacaggttagtgactaagagcagcgtg
gaggaagatatcattgagagagcgaaaaagaagatggtgctggaccatttggtgatacag
cgtatggacactactggtcgaacagtgctggataagaagagtgggtccaacaacacacca
ttcaacaaagaggagctaactgctattctcaagtttggtgccgaggaactctttaaggat
gaggagaatgctgatgaagaaccaacttgtgacatagatgagatcctgcggcgtgcagag
actgcagaggatgcaccagccacagcaggggacgagctactatcagccttcaaggttgca
tcttttgccgctttcgaggaggaccagaacacacagagtgaacaggagccagaggaagaa
acgagagactgggatgaaatcattccaatggactatcggcaaaaagttgaagaagaagag
aaagccaaagaaatggaggacctatacttaccacctcgcagtcgaaaaaccctccagcaa
atcaatcagtctgaaagcgatggtgagggaagcggtaggggcaaaaagaggaaaaagaga
actgactcagaatctggaagtgaggaaggcagtgatgaagaaaggccaaagaaacggggc
aggcctcgacaggctaataaagagatcattaaaggctttacagaagctgagatccgaagg
tttgtaaaaagctataagaaattcccagcacccatgaagcggctggaggcaattgcgtgc
gatgctgagctacaggagaagccactagccgagctgcgcaaattgggagacatgctgcgg
gaacgatgtcaagcgagtgtgggcgagcagcaagcacagaaggaaaatgaaaatgaagac
agcaacctctctggaccacctgggaagagaagagggagaggaccctcaataaagtttgga
ggagtttcggtgaatcctaaaactcttttagccattgaaaaggagctggaacctcttgac
atggagttaccacctgatcctgaagaaaggtcaaaatggactatgacctatccaacaaaa
gcagccaactacgacgtggagtggggagcagtagaggacagtgctctgctgcgaggagtg
taccagtacgggctgggttcttgggaggccattaagatggatccttcactgggtatcagt
gagaagattctggcaaatgatgacaaaaaaccacaggcaaaacatctggacatgagagct
cagtacttgctaaagatactgcgtaaacgaagcggaggtgccgatgccaagaaacctcag
aaaagaaagccaagagccactacaaaagtggatccaccgatgaagaaaccagtgtctaag
gagataattgaagatgacagttcaggagctgaagagaaacctgttgttcccacggccagt
actgccactacagtcacggaaacaaaccacaccaaggagactccacctaaggttaaagtg
gaagaatctgatgtggacaagcacaaacctgacaagaaaaagaaggatgtaatacctaag
aaaaagagaaagaaaggaagtgatgggccaatgcattttacagccaatagtgaaccaaga
gctttggatgtccttggtgatctggatccatcgatatttaacaagtgcaaggatcttatg
cggccagtgaagaaggcattgaaggcactggacaatccagaccagtcactcagtgagcag
gagcagttgcaaacgacacgaggacatctggtacagattggtgaccagatcaataagtgt
ctcacacagtacaaagatcccgatcatatcaaggagtggcggagccatttgtgggatttt
gtttctaaattcactgagtacgacgcaaagaaacttttcaaactttataaacatgccgct
aagaaagttaaacctgaaaaagaagtggaagaaaagaataaaagttccgagaataaggag
tcaagtgaccataaaaagcatcataaaaagaaaacagaggaagagaaaagcaatagtgaa
ggtcagaattcctcatcaaaaaagacgtctacactaccaccaatcccaaggaattccgac
aaggatgaacgtaaggtgggtgagaaagacaggccaaaggacaaggagaagggggagaag
agaccaaagttggaggcgggggggacgccacaggtgcaaaggaactctggggggttccgt
ccgggctctggggatgcaagaccccctggacctgtcaactccccccattccaggccgaca
gatggggcgggtgatcgctggaatgctaacaggtatggcactgaccacaaaagagaccgg
gacaggttcgagccttatcagaggatgcagggtcctggcagtggttacaaccgggaacga
gacagaaacagaagaccgcatgacaagtccaggtttcatcaagggatgaatcccggctat
ggggaaccactacggtcctggatatga
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integrated database retrieval system
