Homalodisca vitripennis (glassy-winged sharpshooter): 124354911
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Entry
124354911 CDS
T09217
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hvi03037
]
124354911
Cilium and associated proteins [BR:
hvi03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
124354911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_7
TPR_8
TPR_6
TPR_19
TPR_14
TPR_16
TPR_9
TPR_11
TPR_17
TPR_10
ANAPC3
TPR_CcmH_CycH
SNAP
ARM_TT21_C
TPR_21
ARM_TT21_4th
ARM_TT21_5th
HAT_PRP39_C
RNPP_C
TPR_EMC2
RPN7
Motif
Other DBs
NCBI-GeneID:
124354911
NCBI-ProteinID:
XP_046661669
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All DBs
Position
2:complement(151820771..151842636)
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AA seq
814 aa
AA seq
DB search
METIRFVPDDEEEDLYSGFNDFPSALFNTKNLDQDEFVQMALRSSYSKRPGLVSSKPGTA
MRFGTSSGYREGSVRMMTGQESVTRPMTAVRGAGYTSATRAVFDPLNQASAAPLVQMKME
EKPEEKIKKVERRITELIDESCLAASRQQFRQALDKAKEASAKERNLIRLQEQAGLSDTH
NLDLTFSVLFNLASQYAANEMYSEAINTYLVITKNRMFHNANKLKVNIGNIYVKLGQYPK
AIKMYRMALDQVPNTHKDLRIKIMHNIGILFVKMGQFSDACSSFEYIMQEKPDFKAGLHA
IVCYYAMDDKDRMKQGFQMLLEVILDIDDEDKYIPTSEDPMSNLVLEAIRTDSLHALEKQ
IKREAERSILTAAKLIAPVIEDNFTAGYNWCVEAINNSVYAPLAGDLEINKAVTFLKQKE
ISQAMDTLKTFQRKESKVASTAASNMAFVHFLQGDVEQAEKCGELAREVDGYNAAAYVNL
GNCSLAKGDQQKAKQFYSLALDNDASCIEALYNLGLVNKQLGLFEEALDCYLKLHAIVSH
HPQVLYQLAHLHELVGDVDQSIEWFLQLLGIIPTDSGILHKMGEIFDSENDKQQAYHYHF
ESFRYFPSNLTVLDWLGAYYVSLQVAEKAVAFYEKAALMQPTEPKWKLLIGSCHRRSGNY
QLALRTYKDILAEFPENIECLKFLVRMCSDMGLPEAATYATQLKRAEKAKELRERIGSSQ
SGSGSRRSSGRSSQGLPSPVSDSTPPTRGRQARLSALESGTAGDNFGRSQFRDVDASYAD
PLGPQERPRTAARSRSQMEDEFGDEDLAEFLLPE
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaataagatttgtacctgatgatgaagaagaggatttatattcaggttttaac
gatttcccttctgctctgtttaatactaaaaatctggatcaggatgaatttgttcagatg
gcacttcggtcatcatacagcaaaagaccaggtttggtgtcatcaaaacctggcacggcc
atgcggtttggaacatcttcagggtacagggaaggctctgtacgtatgatgacaggacag
gagtcagttacgaggcccatgacggcagtgagaggtgcaggttacacttctgccactagg
gctgtcttcgaccctctcaatcaggcatcagcagctccactcgttcagatgaaaatggag
gaaaagcctgaggagaaaattaaaaaggtggaacgtaggatcacagaactgattgatgag
agttgtctggcagcatccaggcaacagtttcgccaagcactagacaaggctaaggaagcc
tcggccaaggaacggaatctcatacggctgcaggagcaggccggactatccgacactcac
aatttggatctcaccttctcagtattatttaacttggccagccagtatgcagcaaatgag
atgtattcggaagcaattaacacttacctggtgataacaaagaaccgaatgttccataat
gccaacaaactaaaagtgaacattggcaatatttatgtcaagttgggccaataccctaaa
gctataaaaatgtaccgaatggcactggatcaagttcctaacactcacaaggatctcagg
attaaaataatgcacaacattggtattctgtttgtcaagatgggacaattcagtgatgcc
tgttcaagctttgaatatattatgcaagagaaacctgactttaaggcaggacttcacgca
atagtgtgttattacgcaatggacgacaaggacagaatgaagcagggattccagatgtta
ctggaagtgatcttggatattgatgatgaagacaagtatattccaacatcggaagatccc
atgtcgaaccttgtgttggaagcgatacgtactgacagtctccacgctctagagaaacag
atcaagagagaggctgagaggagtattctgacagcagccaaactgatagccccagttata
gaggataactttacagcaggatataactggtgtgtagaggcaatcaacaactcggtatat
gctcctctggctggagatctagagatcaacaaggctgtgacattccttaaacagaaggag
atatcacaagcaatggatactttgaaaacattccaacggaaagaaagcaaagtcgctagc
actgctgcatctaatatggcttttgtgcattttttgcaaggggatgtggagcaagcagaa
aagtgtggtgagctggccagggaggtggatggatacaacgcagcagcctatgtcaacctg
ggcaattgcagcctggccaagggggaccagcagaaagctaagcagttctattctcttgcg
ctggacaatgacgcttcttgtatagaggccctgtacaacctcggactggtgaacaagcag
ctgggactgtttgaggaggccttggattgttacctcaagttacatgccatcgtaagccac
cacccacaggtgttgtaccagctggcacacctccatgagcttgtgggagatgtggaccag
tccatcgaatggttccttcaactgctgggaataatacctactgattcagggatactgcat
aaaatgggagaaattttcgacagtgagaatgacaaacaacaagcgtatcactatcacttt
gagtcctttcgctatttcccatccaacctgacggtgttggactggcttggagcctattat
gtttctctccaagtggctgagaaggctgtagcattctatgagaaggcagctctcatgcag
cccactgaacccaagtggaagcttctcattggctcgtgtcacaggcgcagtggcaactac
cagttggctcttcgcacttacaaggatatactagctgagttcccggagaatatcgagtgt
ctcaagttcctggtaagaatgtgcagtgacatgggccttcctgaggcagcgacatacgcc
actcaactgaagagggctgagaaagctaaggaactgagggagaggatagggagcagccaa
tcaggttcaggctcacgacgcagcagtgggcggtcgtcacaaggcctgccgagtcctgtc
agtgactccaccccgcccactagaggcagacaagctagactgtcagcactggagtctggc
acagctggagacaactttggcaggagccagttccgtgatgtcgatgcaagttatgctgac
ccacttggcccccaggagcgacccagaactgctgctcgatcccgcagtcagatggaggat
gagtttggtgatgaagatctggccgagtttcttttaccagaataa
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