Homalodisca vitripennis (glassy-winged sharpshooter): 124354979
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Entry
124354979 CDS
T09217
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124354979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvi03021
]
124354979
03036 Chromosome and associated proteins [BR:
hvi03036
]
124354979
Transcription machinery [BR:
hvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124354979
Coactivators
SAGA/TFTC/STAGA complex
124354979
Chromosome and associated proteins [BR:
hvi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
124354979
STAGA complex
124354979
TFTC complex
124354979
SAGA complex
124354979
SLIK complex
124354979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_VPS8
Beta-prop_Vps41
Beta-prop_WDR75_2nd
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
PEP5_VPS11_N
Tricorn_2nd
WDR54
WD40_like
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
124354979
NCBI-ProteinID:
XP_046661774
LinkDB
All DBs
Position
2:complement(163923718..163948025)
Genome browser
AA seq
676 aa
AA seq
DB search
MEVDHSLAVSAAGQVTTAAALNSGDSQQAPDKSTVLAVLQLLRKYNLKSTEESLLREANV
NLDIGNQGSESEVNTVLSAYKSEGNPEFYEEAYTDLKKFVEGALDTYKHELGMVLYPVFV
HMYLELVYNGHEAQAIRFMQQFSGDQEIYYQDDLRRLAFVTKKDQMKGNQLAETFKSNEF
IIRMSRDTLTLLKRHLQEKKHSVLLNIIQEHLYFDMYEGVARNKQQIDATAGAMVGEATR
QDNKTKIFYGMLKEPDIQYVPADEEEDGGEGEGGDKPKKKKAKKDPLLYKKAKSDPNAPP
CDRLPLPELKDADKLEKVKAMREAIKRVTLGPENLPSICCYTLLNASHTVTCAEIAEDSS
VLAVGFADAVVKVWSLMPQKLRAMKPAEVLQEIDIEAEDVLARIMDDRSAETTRSLLGHN
GPVYKVSFSPDRSLLLSCSEDSTIRLWSLMTWTCLVAYKGHMFPVWDVRFSPHGHYFATA
SHDRTARLWATDHYQPLRIFAGHFSDVDCVQFHPNSNYVATGSSDRTVRLWDCITGNHVR
LMTGHKGSIYALCFSIEGRFLVSAGSDCRLLLWDLAHGHLLAELTGHSATVHSLSFSRDG
HILTSGSLDCTIKVWDFTKLTDEVTLEDVNISHNPEIKKNSDKYLLRSYATKNSPVLCLH
FSRRNVLMTVSMYDSS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggaccattccttagccgtgagtgctgctggacaggtgactactgctgcagcc
ctcaacagtggagactctcagcaagctcctgacaagagcacagttctggctgtgctgcag
ctgctgaggaagtataacttgaaaagcacagaagagagcctactgagagaagcaaatgtg
aatttggacattggaaatcaaggttcggagtctgaagtgaacacagtgctgtcagcatat
aagagtgagggcaatccagaattctatgaagaagcttacactgatttgaaaaaatttgtt
gaaggtgcattggatacatacaaacacgagttggggatggtgctgtatcctgtgtttgta
cacatgtacctagagctggtgtacaatggtcacgaggcacaggccatcaggttcatgcaa
cagttcagtggagaccaggagatatactaccaggacgatctgcgtaggctggcctttgtc
accaagaaggaccagatgaagggcaaccaacttgcagagacattcaaatcaaatgaattc
atcatccgtatgtcacgagatacattgactctgctcaagcggcacctgcaagaaaagaag
cacagtgtcctgttgaacatcatccaggaacacttgtactttgacatgtatgagggtgtg
gcccggaataagcagcagatagatgcgactgctggagctatggtgggagaagctacaagg
caagataataagaccaagatattctatggcatgctgaaggagccggatatccagtatgta
ccagcggatgaggaagaggatggtggcgagggagagggcggagacaaacccaagaagaag
aaggccaagaaggatcctctgttatataaaaaagccaaatctgatcctaatgcacctcca
tgtgatcggttacccttaccagaattgaaagatgcagacaaactggagaaagtgaaagcg
atgagagaggctatcaagcgagttacactgggacccgagaatctgccatcaatttgctgc
tacacccttcttaatgcatctcacacggtcacctgtgctgagatagctgaagactccagt
gtcctggctgtgggatttgcagatgctgttgtcaaggtgtggagcctaatgccgcagaaa
ctgcgtgccatgaaacctgcagaagttttacaagagatagatatcgaagcagaggatgtt
ctggcccgtatcatggatgatagaagtgctgaaacgacgcgtagcctcctcggtcacaac
ggcccagtctacaaggtgtccttcagtcctgatcggtcactacttttgtcctgctcagag
gacagcacaattcgactgtggagcctgatgacttggacgtgtctggtcgcgtacaagggt
cacatgttcccagtgtgggatgtgcgattctcgcctcatggccattattttgctacggca
agccacgaccgcactgcacgactgtgggccactgaccactaccagccgctgcgcatcttc
gctggtcatttttctgatgttgattgtgtacagtttcaccccaactcaaactatgtggcc
acgggctctagtgatcgcactgtacggctgtgggactgcattacaggaaaccatgttcgg
ctcatgactggccacaagggttcgatctatgccctgtgtttctccatcgaaggcagattt
ctggtgtcagctggtagtgactgtcgtctgctactgtgggacttggctcacggtcacctg
ctcgcggaactcacaggtcattcggcaaccgtgcacagtctttccttcagccgagatggt
catatcctcacttctggatctctggactgcactatcaaggtatgggacttcaccaagctg
acagatgaagtgacactggaagatgtcaacatctcacacaacccagagatcaagaagaat
agtgataaatatctgctacgctcctacgccaccaagaactctcctgtcctttgtcttcat
ttctcgagaagaaatgtcttaatgactgttagcatgtatgattcgtcctga
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