KEGG   Homalodisca vitripennis (glassy-winged sharpshooter): 124355040
Entry
124355040         CDS       T09217                                 
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
hvi  Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03013  Nucleocytoplasmic transport
hvi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124355040
  09122 Translation
   03013 Nucleocytoplasmic transport
    124355040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hvi03019]
    124355040
   03041 Spliceosome [BR:hvi03041]
    124355040
Messenger RNA biogenesis [BR:hvi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     124355040
Spliceosome [BR:hvi03041]
 Complex C
  Other components
   EJC/TREX
    124355040
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    124355040
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_EML_2 WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz EIF3I ANAPC4_WD40 Beta-prop_Aladin WDR55 WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_TEP1_2nd eIF2A Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Tricorn_2nd WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_WDR36-Utp21_1st RMC1_N PD40 WDR90_beta-prop_4th Beta-prop_TEP1_C B-prop_COPA_B_2nd Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 WD40_RFWD3 NBCH_WD40 Cytochrom_D1 Beta-prop_ELP1_1st Beta-prop_Nup120_160 PROPPIN
Other DBs
NCBI-GeneID: 124355040
NCBI-ProteinID: XP_046661908
LinkDB
Position
1:complement(226021434..226030663)
AA seq 267 aa
MVCFEATKEFTFGGHGGSVDQVCWHASNPELLSTASGDKSVRIWDARYQKCAATINTKGE
NINITWSPDGNTIAVGNKEDLVTFIDSRTYKIKAEEQFNFEVNEISWNNQSSLFFLTNGQ
GCIHILSYPELELQHVLKAHPGTCICIEFDPTGRYFATGSADALVSLWDVDELACVRTFS
RLDWPVRTISFSHDGQLLASASEDLVIDIAEVETVSEGSGTFPLKLPTFTVAWHPKMYLL
AYACDDKEQYDRKRDTGNLKVFGFPSD
NT seq 804 nt   +upstreamnt  +downstreamnt
atggtttgttttgaggcaaccaaagagttcacattcgggggccacggaggtagtgttgac
caggtatgttggcatgcttcaaacccagagttgctcagcacggccagcggtgacaagagt
gtgcgaatttgggatgcgagatatcagaaatgtgcagcaaccattaatacaaaaggagaa
aacataaacataacatggtcaccagatggcaatacaatagcagtcggcaataaagaagat
cttgtcactttcatagactcacggacatataagattaaagccgaagaacaatttaatttt
gaggttaatgagatctcatggaataatcaaagctctctatttttcctcactaacggacaa
ggctgtatccatatattgagttatcccgagctagaattgcagcatgtactaaaagcacac
ccaggtacctgtatttgtatagaattcgaccccactggaagatattttgcaacaggatct
gctgacgctttagtttcactttgggacgttgatgaactggcatgtgtgaggaccttctct
aggttagattggccagtcagaacgatcagcttcagccacgatgggcagctcctagcgtcg
gctagcgaagacctggtgattgacatagcggaagttgagacggtgagcgaagggtcgggg
acattcccgttgaagctgcccaccttcactgtcgcgtggcacccgaagatgtacctcctc
gcgtacgcctgtgacgataaggaacagtacgatcgcaaacgggacaccgggaatctcaaa
gtgttcgggtttccttcagactag

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