Homalodisca vitripennis (glassy-winged sharpshooter): 124355373
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Entry
124355373 CDS
T09217
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hvi03400
]
124355373
DNA repair and recombination proteins [BR:
hvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
124355373
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
ATG17_like
Peptidase_M16
GAS
AAA_29
AAA_13
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
124355373
NCBI-ProteinID:
XP_046662446
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All DBs
Position
2:complement(209505204..209556225)
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AA seq
1055 aa
AA seq
DB search
MDSGYFTQSQQKSSHSSVDYGPAGTIVKVQMKNFMCHDNLEVKLNSRINFICGKNGSGKS
AIQTAIAVGLGGKALATNRGSSLKDLIKSEKSSCTIIIVISNQGPVAYKPQEYGPLIQVE
RGFSQTSSLGYKIKNSAGRIVSTKKAELDKILAQFNIQTENPVCILHQDVARNFLNSSDP
KNKFMFYLKASRFDEINSIYSENRLRIYAVTESIERKFEGLKEVFSDVIEMKKKLKTLEE
AKEKDRLRINLENEMLWAVINEDTAKAEELKKRREIEILAKNKAEKKLVEVEESNLKDKT
ERTRGXNKEMDNMVKDAREKVQSAREDFTNKKEIWNNYIKELNETKQSLRLARRKYDSCM
AEIENLTKNAPEIKQRQESLKRQIAEYEQKLQSIKAAEMSFEHDRQQLKDTVEQVAGTIE
AMTSRWDNIQRQKRKREENLKMLSRNASSLSVYGEGVVNIVDEINKAVARRKFEKKPIGP
LGLHIKVKDSVWSGAVENFLSKSILTAFCVDNNRDASVLSGILKYVCERYKIPQPSIFCS
KFLPNVHNIRESETGNHKYMSLARALEIDNPVVANCLIDQQEIETVLLIPTNAEAYNILD
EPRKVPRNCRRAFTLTGDLFFPAPNYKSYSNSRPVTHATLLQAKQEDLIRNLKNEITTFS
QELNSVVAERQGMQEQMKNTMNSLRKNEEELRNLKKQRFAVEHKIKEMVNSIEQEKDESN
VAYLVQESKVLQAQLDKENEILERLKNIGGNLKTNAENAKTEYESLQNTIAESDQEKAPI
QGKIEHLKSAIQQASLKSDHIQAKIREYEENVNKIEAELTELTDKINMQTSDAIQICDPI
RVTRESGEIKRELKQVQMYLQRLEEENGGSLQVLERNFKERHDQFNKINYELGELKSLLR
KTKDALVKRRQKEHQLQISMSTSARHNFHMYLTERDFDGWLKFDFSEKTLNIIVRHQAET
DLAVQTNTSSLSGGEKSFSTVAFIMAMWQEVKLPFHFLDEFDVFMDGINRRIVMDMLIEH
AKETKQQFVFLTPLDMSSVSSSNIITIHRLEAPRD
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggactctggttatttcacgcagtcccaacagaaatcttcacattccagtgttgactat
ggaccagctggaaccattgtcaaggttcagatgaagaatttcatgtgccatgacaattta
gaggtgaagttaaattctcggataaatttcatctgtggaaaaaatggcagtggaaagtcc
gctatccagacagcgatagcggttggtctgggaggcaaagctttggctaccaatagaggc
tcttctttgaaagatctcatcaagagtgagaagtcttcttgtacaataatcattgtgatc
tccaaccaggggccagtcgcttacaagccgcaagagtacggccccctcattcaggtggag
agaggtttctcccagacctcttcacttggttacaagatcaaaaactcagcaggaaggata
gtctctacaaagaaagcagagctagataaaattctcgctcaattcaacatccagaccgaa
aacccagtgtgtatcctgcaccaagatgtcgcaaggaacttcctgaactcctctgatcca
aaaaacaagttcatgttttacttgaaagcctcccgttttgacgagatcaacagtatatac
tctgaaaatagattgagaatatatgctgtaacggagtccatcgaaaggaagtttgagggc
ttgaaagaagtatttagtgatgtaattgaaatgaagaaaaagctaaagactctggaagaa
gccaaagagaaagacagactccggatcaatcttgaaaatgagatgctttgggctgtgatc
aatgaagacacagcaaaggcggaagaactgaagaaaaggagggagattgaaattttggca
aaaaacaaggctgaaaagaaattggttgaagtagaagaaagcaatttaaaggacaaaact
gagagaactagaggatagaataaagaaatggataatatggtgaaagatgcaagagaaaag
gtgcaatctgctagggaagattttaccaacaagaaagagatctggaacaactacatcaaa
gaactgaacgagactaagcagagccttaggctggccaggcgcaaatatgacagctgcatg
gcagaaatagagaacttaacaaagaatgctccggaaattaaacaacgccaggagagtttg
aagaggcaaatcgcagagtatgagcagaaactgcagtctatcaaagcagcagagatgagc
ttcgaacacgaccggcagcagttgaaggacacggttgaacaagtcgccgggacaatagag
gctatgactagccgctgggacaacatccagcgacagaaaagaaagcgggaggaaaacttg
aagatgctgagtcgaaacgccagcagcctttcggtgtacggagagggcgttgtaaacatc
gtggatgagatcaataaggcagtggcaagacgcaagtttgaaaagaaaccaattggaccc
ctagggctgcacatcaaagtgaaggactcagtgtggtctggagctgtggagaacttcctc
agcaaatccatattgactgcgttctgtgtcgacaacaacagagacgcttcagtcctgagc
ggaatactcaagtatgtctgtgagcgttacaaaataccacagccttccatattctgcagc
aaattcctgcctaatgtgcacaacataagggaaagtgaaacaggcaatcacaaatacatg
agtctggcgagagctctagaaatagacaatccagtagtggctaactgcctcatagatcag
caagagatagagactgtgttgctgatacccactaatgcagaggcatacaatatcctggat
gaaccacgcaaggtgccacgcaactgtaggagggcctttacactgacgggagacttgttc
ttcccggctcccaactacaagtcgtactctaactccagacctgtgacacatgccaccttg
ctgcaggccaagcaagaggatcttatcagaaacttgaagaacgaaattacaacattttcc
caagagctgaactctgtagttgcagaaagacaaggtatgcaagagcaaatgaaaaacaca
atgaactcgctgagaaaaaacgaagaagaactgaggaacctgaagaagcagaggtttgct
gtggaacacaaaatcaaagagatggtgaacagtatagagcaagagaaagacgaaagcaat
gttgcgtacctagtacaagagtcaaaggtgttacaggctcaattggataaagaaaatgag
attttggagagattaaagaacataggtggaaacctgaagacaaatgccgaaaacgctaaa
acggagtatgaatctttacaaaacacaatagcagaatccgatcaagaaaaagcgcctatt
caagggaaaatagagcatttaaagtcagcaattcaacaagcatctttgaagtcagatcat
attcaagccaagataagggaatacgaggagaatgtgaacaaaatagaagcggagctgaca
gagttgacagataagatcaacatgcagacaagcgatgctattcagatttgtgatccaata
agagtcacgcgagaatcgggtgagatcaaaagagaattgaaacaagtacaaatgtatctg
caaagattggaagaagagaacggaggatcgttgcaagtcctcgagaggaactttaaagag
agacacgaccagttcaacaaaatcaattatgagttaggagagctgaagtccttgttgagg
aaaactaaagatgctttagtaaaaaggagacagaaagaacatcagctgcagataagcatg
tctacatcggccaggcacaacttccacatgtatctaacagagcgtgactttgatggctgg
ttgaaattcgacttctctgagaagacattgaatatcatagtgagacaccaggctgagact
gacttggccgtccagactaacacctcttcattgagtggtggggagaagagtttctctaca
gtcgcttttatcatggccatgtggcaagaggtgaagctacccttccacttcctcgacgag
ttcgacgtcttcatggatggcattaaccgccgcattgtgatggacatgctgatagaacat
gccaaggagaccaaacaacagtttgtgttcctgacacctctggacatgtcgagtgtctct
agctccaacattatcactattcacagattggaagcccctagggactaa
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