Homalodisca vitripennis (glassy-winged sharpshooter): 124355405
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Entry
124355405 CDS
T09217
Name
(RefSeq) S1 RNA-binding domain-containing protein 1
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
S1
Tex_central_region
HHH_9
HHH_7
YqgF
FliS
S1_RRP5
MGDG_synth
Motif
Other DBs
NCBI-GeneID:
124355405
NCBI-ProteinID:
XP_046662490
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All DBs
Position
2:216496562..216560609
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AA seq
966 aa
AA seq
DB search
MDPANSDEDNHDSTDSTSLPTNDVKVEKSSANSEKAIRLRAKPDIPVMFSDSEDSFDGYY
SKKRKNDSESEDDWAPKKGKAASPKKKVKTEKPPRKPRKQRESKSKTPKEPKPKKEKGTP
KPRKPRGKKAKEVKEENSNDASDLNDEPDPPPEKKTEEEVDGEGDVDGDNDTAEESNPPS
AEYSVPKPAWEQGELLSEMISVERRIAENIVKLFENENTIPFIARYRRDMTGDMSPEDLR
KAKDAFETIKSIQAKSTSILKAINKIGKLNNHLERCIVGARSIVELEHLYAPYKAGGKRT
KADAARQLGLEPAAMTLLEGTDYMALEPLVREDTPGRETIWEVEANISYIIADVISKDKD
VLDHLRSLQQNAGNIRIESAMSKTAKSSGKEKTNPKKDTKPENLAQKKGVEEGKYELYYN
FSVPVRHVKPHQVLAINRGESQKVLSVKIAVPDWLINKLHDFCKYRWLRTGYEYPLRLHF
FEKSFKDAYTRLIHPLIARQVRSKLNQEAERAAIDVFATNLKKLLLTPPLRGTPILSIDP
GFSNGCKAAVISSTGTVLAAEVLHINFKPVKFRPPPEDPVAVRLKQLLSTHSCELIGIGN
GKGCRETEEYLSQLIQSGWFQPMDVQYTIVSEQGASIYSCSSEAIQEFPKLDRNLISAVS
LARRVQDPLSEMVKVEPKHLGVGMYQHDVPEKQLNATLDEVVSECVSFVGVDINTASLSV
LRKIAGLNQSRAGKILEWRECNGQFTNRQQLRLVKGIGDKTYEQCAGFVRVVPQTAQAGS
SSQQGKRQQLPKKQSTSVETDFNPLDQTWIHPESYSTAYRFIKKCGVDLKNLGTPHFIAN
VERTVRENGLTALSQELSTTEAVVRLIAEGLKNPLDHDIRSELSKPLFRRGVTSLEDLKI
GIILTGRVQNVTHFGTFVDIGVGINGLIPASRLRNVTPQLGDRIEVRVFNLEPERKRIGL
DLVKIL
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggatccagcaaattctgatgaagacaatcatgattcaaccgactcaacatcgctgcca
acgaatgatgtaaaagtggaaaagtcatcagcaaatagtgagaaagctatcagattacga
gcaaaacctgatattcctgtaatgttttctgacagtgaagattcatttgatggttactat
tctaaaaagagaaaaaacgattcagaaagtgaagatgattgggcacccaaaaaaggtaaa
gctgcctcacccaagaagaaagtaaaaacagaaaaaccgcccagaaagcctagaaaacag
agagagtcaaaatcaaaaacaccaaaagaacctaagcccaagaaggagaaaggaacgccc
aaaccgaggaagccgagaggaaagaaagcaaaagaggtgaaagaggagaactcgaatgat
gcatcagacttaaatgatgaaccagacccgccccctgagaagaaaacggaggaggaagtg
gacggagaaggtgatgttgatggtgataacgacacagctgaggagagcaacccaccgtcg
gccgagtacagtgtgcccaaaccagcatgggaacaaggcgagctgctgtcagagatgatc
agtgttgagaggaggatagcggaaaatattgtgaaacttttcgagaacgagaacacaata
ccattcatcgccagatacaggagggacatgactggggatatgagtccagaggatctgagg
aaggcaaaggatgcatttgaaacaataaaatccattcaagcaaaatcaacgtcaatttta
aaagccatcaacaagattggtaaactgaataatcacttggagcgttgtattgtcggtgca
agaagcatcgtagaattggaacacttgtacgcaccgtacaaggctggtggaaagcgcacc
aaggcagatgctgcgcgacaactgggtctggagcctgcagcaatgaccctgctggaggga
acggattacatggcactggagcctctagtcagggaggacactccgggtcgtgagaccatc
tgggaagtggaagcgaacatttcgtacatcatcgctgatgtcatcagtaaggacaaagat
gtcctggatcatctgagaagcctgcagcagaatgcaggaaacattagaattgagagcgcc
atgtcaaaaacagccaaaagcagtggtaaagaaaaaaccaaccctaaaaaagacaccaag
ccagaaaatcttgcacaaaagaagggagtagaagagggaaaatatgagttgtattataat
ttttccgttccggtcagacatgtgaaaccacatcaggtgctcgcaatcaatcgtggagag
agccagaaagtgctctctgtaaagattgcagttccagactggctgataaacaaactacac
gatttctgcaagtatcggtggcttaggaccgggtatgaatatcctcttaggctacatttc
tttgagaaaagcttcaaggacgcttataccagactgatacatccactaatcgccaggcaa
gttcggtcaaaactaaatcaggaagctgaacgggcagctattgacgtgtttgctacaaac
ctaaagaagcttctcctcacaccaccgttacgtggaactccgatcctcagcatagatcct
ggtttcagcaatggctgtaaggctgctgtcatttcatctacaggaactgttctagcagct
gaagttctccatataaacttcaaacctgtcaagttcaggccaccacctgaggatcctgtc
gctgttagactgaagcagcttttgtccacccacagctgtgagctgatcgggataggcaac
ggcaaaggttgtcgggagacagaggagtacctaagtcagctgatacagtccggctggttc
caaccgatggatgtccagtacacgatagtcagcgaacaaggggcttccatatacagctgt
agcagtgaggcaatccaagagttccccaaactggaccggaacctcatcagtgcagtgtcg
ctggcccgtcgtgttcaagatccactgtccgagatggtgaaagtggaacccaagcacctg
ggagtgggcatgtaccagcacgatgtgcccgagaaacagctcaatgctactctcgatgag
gtggtctcagagtgtgtcagctttgtgggagtggacatcaacacagcctctttgtctgtc
ctcaggaagatcgctggcctgaaccagtcccgagccggaaagattctggagtggagggaa
tgtaacgggcagttcaccaacagacagcagttacggctggtcaaggggatcggagacaag
acgtacgaacagtgcgcgggcttcgtgcgagtggttcctcagactgcacaggctggcagt
tcaagtcaacaagggaagaggcagcagttgcctaagaagcaaagcacgagtgtggaaaca
gacttcaaccccttggatcagacatggattcaccctgagtcttacagtacagcgtacagg
tttattaaaaaatgtggtgtagatctgaaaaatcttggaactccccactttattgcaaac
gtggagaggacagtgagagaaaatggactaactgctctgagccaagagctatcgacgact
gaggcagttgtgcgtctgatcgcagaaggtctcaagaaccctctggaccatgatatacgc
tcggagctcagcaagccgctgtttcgtcgcggagttacatcactggaagacctcaagatt
ggaatcatccttacaggtagggtacagaatgttacacattttggcacatttgtggacatc
ggagtgggaataaacgggttgatacctgcaagcagattgaggaatgtgactccgcagctg
ggagaccgcatcgaagtgcgagtcttcaatcttgagcctgaacgcaagcggattggcctg
gatctcgtcaagatactgtag
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