Homalodisca vitripennis (glassy-winged sharpshooter): 124357381
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Entry
124357381 CDS
T09217
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124357381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvi03021
]
124357381
03036 Chromosome and associated proteins [BR:
hvi03036
]
124357381
Transcription machinery [BR:
hvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124357381
Coactivators
SAGA/TFTC/STAGA complex
124357381
Chromosome and associated proteins [BR:
hvi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
124357381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
124357381
NCBI-ProteinID:
XP_046665094
LinkDB
All DBs
Position
1:12910475..12969346
Genome browser
AA seq
1067 aa
AA seq
DB search
MTYGWPQEIGFKNSNLTIENNDVVFYIDFTLKYLWFNKNISLKVKNYIIVFLFFKGNALW
VRFVHCACADQFTVGFWHKMASAKFLEEALTSTDVDESAVNALVGSLETSLVTTTPAVSN
QQGVSVNVNQNHLNSAISNGSSISSQKHGVLNGGSDSMNIILNSDANKVISCSNHQSALP
SVVNTVVASLHGGVPSSGYINQVTSNIGLVQSNLANLNKSQDTVKLVYPSSTQSATTTIG
GVNRVTYPNNQTISSLPNGNLGLTSLTSNSSVLTVSNSSVQSVVSQSYSQAGTNVNKQVG
GVGVIGMDQNKPTGTALVIKSSGNNHGPQGVTQGLVSVPMTVGTTTMTLTGTHVNAALGT
TTTSGVPGVVTLTKPINQSVGSQPGIVGNNPTLIPANVQILNVNTIRPGTPVQPGQKTAS
PRVMTIGTPQMVGARPGQPGQPITLQTLQSLQGAQGGHLLLKTENGQYQLLRVGPAQTPT
AAIAPNNAATNTAAFRVQSVPAGGAVAAAVQTQVPALTTQTTATTAATTSQRHPSADTVK
EKCRKFLANLLELSSREPKAVERNVRTLIQELVDTKVEPEEFCDRLERLLNASPQPCLIG
FLKKSLPLLRQSMVAKELVIDGIRPPPASVLYSTPTVVQQTIQQGTTRAQPQLQVNTPQM
RVITQTAPTTVVGTPPRASQPVQHRIVTPLRVPAPGTKVAPGTPIVGLRPQTPLVPGNTT
AIRLQTPIRTTTLTKPGQHTTVPIGIKAPALAAAGLKPGQMLAKATIATRPVGSPLATTS
LKQPIHGPAPSILLKAVTGTKEKEKKTYSSTGYTGDDDINDVAAMGGVNLAEETQRILGS
TEFVGTQIRSCKDDIYLHSTPLMQKINQIAAKHGLEEPSSEVAALISHATQERLKNIVEK
LAVIAEHRIDLNKLDPRYEVTQDVRGQLKFLEELDRVERKRHDEQERELLLRAAKSRSKS
EDPEQAKLKAKAKEMQRAEMEELRQREANLTALQAIGPRKKPRLDGSDSFSMSGQASCSS
STSNGSVNRSQTLRPRLKRVNIRDLLFLLETEKDTCHSSLLYRAYLK
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgacatatgggtggccgcaggaaatcggttttaaaaattctaatttaaccatagagaat
aatgatgtagtgttttacattgattttacgctgaaatatttgtggtttaataagaatatt
tcactaaaagtgaagaactacattatagtttttcttttcttcaagggcaatgcactgtgg
gtacgatttgtccactgcgcatgcgcagatcagtttacagttggattttggcataaaatg
gcgtcagctaagtttctggaggaagctctcacatctacagacgtggatgagtcggcagtg
aatgcgttagtgggatctttagaaacgtcattagtaactacaacacctgctgtttctaat
cagcaaggagtttcagttaatgtgaatcaaaaccatttgaacagtgctatttctaatgga
tcctcaatatcgtctcagaaacacggtgtcctcaacggtggatccgattctatgaatatt
attctaaactcggatgcaaacaaagttatttcgtgtagtaatcatcagagtgctttacct
agtgtagtgaatacagtggttgcatctttgcatggaggtgttccatctagtgggtatata
aaccaagtaacatctaatataggtttagttcaatcaaatcttgcaaatttaaataaatca
caagacacagtaaagcttgtttatcctagcagtactcagtctgctactacaactatagga
ggagttaacagagtaacatatcctaataatcagacaatttcctctctacctaatggtaac
ttagggctcacatcattgacttcaaattcctctgtattgactgtgtcaaattctagtgtt
caaagtgtagtttcacaaagttattcacaagcaggtactaatgtaaacaaacaagttggt
ggtgttggtgtaattggaatggaccaaaataaaccaacgggcacagcattagtaattaag
tcgagtggaaataatcatgggccccaaggtgtaactcaaggacttgtttctgtgccaatg
actgtaggaactactacaatgacattgacaggaacacacgtaaatgctgccctcggcact
acaacaactagtggcgttccgggagttgttactttaactaagcctattaaccagtctgtt
ggatctcaaccaggtattgttggtaataatccaacattaataccagctaatgtacaaatt
cttaatgttaataccattagacctggtactcctgttcaacctggacaaaaaacagcttcg
cctagagtaatgactattggaactcctcagatggttggtgcacgtcctggacaacctggg
caaccgattactctacaaacattacaaagcctgcaaggtgctcagggtggccacctgttg
ctcaagacagagaatgggcagtaccaacttctacgggtgggtccggcccaaactccgaca
gctgcaatagctcccaacaatgctgcaaccaacactgcagcatttagagtccagtctgtt
ccagcaggtggagcagttgctgctgctgtccagacacaggtgcctgccctcaccacacaa
acaacagctaccacagccgcgacaacatctcagcgacatccatctgctgacacggtgaaa
gagaaatgtcgaaagttcctagcaaacctgttagagttatcgtcgagagaacccaaagct
gtagaacgcaatgtgagaacgctcatacaggagctagtggataccaaggtggaaccggag
gagttctgtgatagactggagaggctactcaacgcttcacctcagccttgtctcatagga
ttcctcaagaaaagtttaccactgttgcgtcagtccatggtagccaaagaacttgtgata
gatgggatccgcccgcctccagccagcgtgctgtacagtactcccactgtggtgcaacag
actatacagcaagggacaacaagggcccagccgcagctgcaggtgaacaccccccagatg
cgagtgataacgcagacagcacccacgaccgtcgtgggaactcctcctcgtgcctctcag
cccgtccagcaccggatcgtcactccactgcgagtaccagctccagggaccaaggtcgca
cctgggacacccatcgtggggctgaggccgcagacacctctggttccaggaaacactact
gccatcagattacagacgccgatacggaccacaaccctgaccaagcccggtcaacatacc
actgtgcccatcggcatcaaggccccggccctggccgctgcgggcctcaagcctggccag
atgttggccaaggctaccatagccacgcggcctgtcggctcacccctggccaccacctcc
ctcaagcagcccatccacgggcctgctccttccattctcctcaaggctgtgactggtacc
aaagaaaaggaaaagaaaacttattcctccacgggatacacaggtgacgatgatataaat
gacgtggctgctatgggaggagtgaatcttgctgaggaaacgcagaggatattgggctca
acggaatttgttggaacccaaataagatcgtgcaaagatgacatttacttgcattccacc
cctctgatgcaaaaaattaaccaaattgcggcaaaacatgggctggaagaaccgagttca
gaagtggctgccctcatatcccatgcaacgcaagaaagattaaaaaacattgtagaaaag
cttgctgtgatagccgaacacaggatagatttaaataaattggatcctcgatacgaagtg
acccaagacgtgagaggtcagctcaagttcctggaagagctggacagggtagagagaaag
cggcatgacgagcaggagcgggaattgctgttaagagctgccaagagtagatcgaagagc
gaagaccctgagcaagctaaacttaaggccaaagctaaagagatgcagagagcagagatg
gaagagttacggcagcgggaagccaacctcacagccctccaggccattggtcctagaaaa
aagccgagattagacgggtctgattcgttctccatgtctggccaggcatcttgtagttcc
tccacttcaaacggcagtgtaaatagatcacaaacgttaagaccaaggttaaaaagagtg
aacattcgagacctgctgttcctcctggagacggagaaggacacgtgccacagcagcctc
ctgtacagagcatacctcaagtga
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