Homalodisca vitripennis (glassy-winged sharpshooter): 124358360
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Entry
124358360 CDS
T09217
Name
(RefSeq) regulator of nonsense transcripts 2-like
KO
K14327
regulator of nonsense transcripts 2
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03013
Nucleocytoplasmic transport
hvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124358360
03015 mRNA surveillance pathway
124358360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvi03019
]
124358360
Messenger RNA biogenesis [BR:
hvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
124358360
mRNA cycle factors
P-body specific factors
124358360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
DUF4085
ParB
PqqA
Motif
Other DBs
NCBI-GeneID:
124358360
NCBI-ProteinID:
XP_046666618
LinkDB
All DBs
Position
3:133583912..133635237
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AA seq
728 aa
AA seq
DB search
MLQLTDTDTSVEEPTKSEEEVGMDVEDDFNQDEYSHLKEELLTYLQESKHSSNAKFVLLE
RNNSAALQRPNAAEIAKRDSSIKKNTGFIKKLRNLGATQVDQLVIECHSLNLSKYLSEAA
SAIVEARIKFTDIPSAVLLCTEINCVYPEFARPLQDEFIKVLVVNKDEPVANANRLRVEL
CFYAELSLCGIIPARQSLPVLGTTLTALAQDKTFNTLSLILSFCKHCGADFAGLVPRRIR
LLCEQFSVTLKKTTLLGVSKQESVRNLLHDYYLSLCRHLCNEQVKLSAYEKQSRQILIAK
GELRSDRISTAEVMRAEIQTLLSGAVTLAELLDVELPDLPDADFQDLQLGDGEDCSGGHV
WEDETTRLFYTQLPDVKEYLAQLNKQEECKERSTTKSESFKTDDGDSTCKKGALETFLKL
LPNCSNLEMVDNAALEFLVYFNSKIGRKKLTITLFMVPRTRLELLPLYARFVAILSPVVP
DVATNLCQQLKSEMLRHINKKDQVNIESKKKTVKFIGELVNFGVYAKKEVLRALKLLLYD
FTHHNIEMVCCLLETCGCVLYAASDTHLSIKYYLEQMMRLKTIMALDSRYVILIENAYYH
ILPPENTVLQPPVQLTPLQHYISKTIYSDLMEPNSETMVLTVLRSLDWESEETAAYTVQC
LTKAFNIGYSRIRALASVVSMLTDYQEEVVCCVVDGVLEDIRLGMEVNKASMNQRRVAMI
KYLGELYN
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagctgactgatacagatacttccgttgaagagcccaccaaatctgaggaagag
gttgggatggatgtggaagatgattttaaccaagatgaatattctcatttaaaagaagaa
ttattgacctaccttcaggaatcaaaacatagttcaaatgcaaaatttgtgttgcttgaa
cggaacaatagtgcagccttacaacgacccaatgctgctgaaattgctaaacgagactcc
agtataaaaaagaacacaggtttcataaaaaaattgcggaaccttggggccacacaagta
gaccagctggtcatagagtgccacagtctcaatctcagcaaatatctgtctgaggctgcg
tctgccattgttgaagctagaatcaagtttactgacataccttcagctgttctgctctgc
accgagatcaactgcgtgtaccctgagttcgcccgtccactacaggacgagttcatcaaa
gtccttgttgtaaacaaggatgaacctgtggccaatgccaatcggctgagggtggaactg
tgtttctacgctgagctgagcctctgtggcattattcctgctcgacagtcacttcctgtt
ctgggcacaacactcactgccctcgcacaagacaagactttcaacactctcagtctgatc
ctgagcttctgcaagcactgtggagctgactttgctggactggtacctcgccgcatacgt
ctgctatgtgaacaattctcagtgacattgaagaaaaccactctcctgggagtgtccaaa
caagagagtgtgaggaacttgctccatgactactatctatcactgtgtcgacatctctgt
aacgaacaagtaaaactgtcagcatatgagaagcaaagcagacaaattctgatagctaaa
ggagagcttcgcagtgatcgaatctcgactgctgaggttatgcgtgctgagatccaaaca
cttctgagtggagctgtaactttagctgaacttctagatgttgagttgccagatcttcca
gatgctgatttccaagacctacaacttggagatggggaagactgtagtggaggtcatgtc
tgggaggatgagactactcgtttattctacactcagctgcctgatgttaaggagtatttg
gcacaacttaataaacaggaggaatgtaaagaaagaagtacaacaaaaagtgaatctttt
aagacagatgatggtgatagtacatgcaagaaaggtgccttagaaacattcctaaaacta
ttgcccaactgtagcaacttggagatggtagacaatgctgcacttgagttcttagtttac
tttaattccaagattggccgtaagaaactgaccataacgctgttcatggtgccaaggact
agactggaactgctgcctctttatgctcggtttgtggccatcttgagtccagtggttcct
gatgtagcaaccaacttgtgtcagcaactgaaatcagaaatgttgagacatatcaacaaa
aaggaccaagtaaacatagagtcaaagaagaagactgttaaatttattggtgaacttgtc
aattttggagtgtatgccaagaaggaagtgctgcgtgcattgaagctgctcttatacgac
tttacccaccacaatatagaaatggtgtgttgtctactggagacatgtggatgtgtattg
tatgcagcatcagatactcacctcagcattaagtactatcttgagcaaatgatgaggttg
aagacaattatggctttagattcccggtatgtgattctcatagagaatgcatattaccac
atcttgccccctgagaacactgttctacaaccacccgtccagctgacaccactacagcat
tatatctccaaaaccatctatagtgatttaatggagcccaattcagagacgatggtgttg
actgtgctgaggagtctggactgggagagtgaggagacagcagcctacacggtccagtgt
ctcaccaaggctttcaatattggttattctcgtattcgagctctagccagcgtcgtttcc
atgctgacagactatcaggaggaggtcgtctgttgtgtggtagatggagttctagaagac
atccgtcttggtatggaagtgaacaaagcttcaatgaaccagaggcgagttgccatgatc
aagtatttgggcgagctgtacaattaa
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