Homalodisca vitripennis (glassy-winged sharpshooter): 124358370
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Entry
124358370 CDS
T09217
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03018
RNA degradation
hvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124358370
09123 Folding, sorting and degradation
03018 RNA degradation
124358370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvi03019
]
124358370
03041 Spliceosome [BR:
hvi03041
]
124358370
Messenger RNA biogenesis [BR:
hvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124358370
mRNA degradation factors
5'-3' decay
Lsm complex
124358370
Spliceosome [BR:
hvi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124358370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
124358370
NCBI-ProteinID:
XP_046666630
LinkDB
All DBs
Position
1:24225926..24241355
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AA seq
96 aa
AA seq
DB search
MASALESYVNRTVSIITADGRNFVGTLKGFDQTINLILDDSHERVYSLNQGVEQVVLGLH
IIRGDNIAVVGELDDSIDSRLDLNNLRAEPIGPVVF
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgctttggagagttatgtaaatagaactgtttctataataactgcagatgga
cgaaattttgttggaactttaaagggatttgatcagacaatcaacctaatccttgacgac
agccatgagcgagtttacagcttgaaccaaggtgtagagcaggtggtgttgggacttcac
atcataagaggagataacattgctgtagttggagagttggacgacagtatcgattcaaga
ctagatctcaacaacctcagagcagaacctataggccccgtggtcttctga
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