Homalodisca vitripennis (glassy-winged sharpshooter): 124358749
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Entry
124358749 CDS
T09217
Name
(RefSeq) nuclear pore complex protein Nup153-like isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03013
Nucleocytoplasmic transport
hvi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124358749
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124358749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvi03019
]
124358749
Messenger RNA biogenesis [BR:
hvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124358749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
TackOD1
Motif
Other DBs
NCBI-GeneID:
124358749
NCBI-ProteinID:
XP_046667005
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All DBs
Position
1:complement(28284472..28329897)
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AA seq
1346 aa
AA seq
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MAKGSNNLRGRTSDASKPYDVSNSFVKRVASRMTGLLSQPAWLSRWMSPAAVPNVNDFAG
HSLSSTITSRPPATSRAELNLADNVDHHVPAKKPRTSRYNSPINQNNFLRSEVYNAEDIS
PIPVRGEPVASSSSSTNPEIIASTPAVHVQQQNSTKVNGDDCSETSESTSGCSSLVPQAQ
SMTRSLGGHRYRTVASGAHMDSLHRRRPSFSTTTFSSPMRASMRERLGSSPFYSGRTMYG
GSSQAYLSEIHSPQRRVGPTVKPTPAQQAIPLSSTAKRILDALEQFSTPVMDAKRIPVVT
GVKRKLESSNQRYPELSIPSTPDLLRVKRRERLQQSTSAARQTATATTMPSLPSATQYSI
RKEDDDDRKRQTGKVKTKEKVADEALEKVQLPSVVLSVDNLPKIDIAIPPPPRAQSLATI
QPSPVGTGCKFEFVSPQTEQHNVIDHDYKYPVTSFKFSAPISETICKSSDSNKKVVSSGS
VSSLSRTSSDNLTSNLKRQRSKDDGGDETSVSVTGVSTTNLSHSLADSSSWKPSPSNFVT
SQPDVKPNSSCESDTSKRSVNSSDNQWECSGCKNKNLFSIEVCTACKTKKNSKPIDTIKN
NVKPSTTSGFGDLFKKPVGTWECSTCMIQNKNDAVKCVACESAKPVDEEKCKSVPISASK
ANSSVVASPVFGAKVTAETKASTTVVSGFGEKFKKPAGSWDCEACMVTNKNEDLSCVACS
TPKADKKTGNTPKTEIKAETKPSGFGDMFKKPLGSWTCNECFVSNGADEVSCVACQTVKP
GATLPKSEISTPKFSFGIPTSAAVGNKEVSSTFKFGIVNDEQAKSTPSTSFIMPKSSSGN
DLESKAPVSSQVFSFGVPKTAETDENKSGVTTSTPKPVFQFGSAKQNEPEPKLPFGSVTT
TKPNTSDGAFGNAGKTTDKEVIKETAPVKSSIELGITPSTVVSSIPSSNVVDSEKAATPA
LGEKSLTIADKISTTKPMFTFNTNKVTGSLNATDKPNEGSLNPTFMFGKKENSDNVATTV
ITNPIAVSAPVNVFKFGETKTIASSVGSDSSSSVNTQPSFTAPKANNIFTFGSSIEKKEA
NFGTSATKETPSTNTVTLPSNENKPVFGSFGTTSTPSPAFGSNNVFGSSSFGSKDQPNPF
VPQTTSNVFGTTQTTNASATSTFSGFGQTNANAFQNASQDNKSSAVFTFGSASTSSKESA
PSGGGFVFNPVMEKRAEPAFGFSGNQSNPSAPVFGFNSTSSASSTSFNFEPKPFGSGITP
FSGTSEAPAPVFGTPALQQVTPAFGEQTNPNPVFAFGSQPSQTPATSVFEFGSAQQQATP
IAPAPSTTFVFGATPTVATTDPNPIL
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atggccaagggaagtaataatctcaggggtagaacttctgatgcttccaagccatacgat
gtttcaaattctttcgtgaagagggtggcctcacgcatgacaggactgctgtcccaacca
gcatggttgtctcgatggatgtccccagctgcagtgcccaacgtcaatgactttgcggga
cattctctatcatcgactataacctctcgtcctccagctacctcaagagcggagttgaac
ctagcagacaatgtggatcaccatgttccagccaagaagcctcggaccagccgttataat
tctcccattaaccagaacaactttctcagaagtgaagtttacaatgcagaagacatcagt
cctataccagttagaggagagccggttgcgtccagttccagtagtaccaatcctgagata
attgcctccacaccagctgtccatgttcaacaacagaattctacaaaagtcaacggtgat
gattgctcagaaacgagtgaatctacaagtggctgttcatctctagttcctcaagcacag
tctatgactcggagtttgggtggtcacagatacagaactgtagcttcaggagcacacatg
gattcgcttcacaggagaagaccttcgtttagtaccacaacattttcgtcccctatgaga
gccagcatgcgtgagaggctcggcagctcaccattctactccggcagaaccatgtatggg
ggttcgtcgcaggcatacctgtccgagatacactctccacagaggcgagtcggtcccaca
gtcaagcctacacctgctcagcaagcgattcctctcagctctacagccaagcgcatcctg
gatgccctggagcaattttccacaccggtaatggatgcaaagcgcatacccgtggtgacc
ggagtgaagagaaaactagagtcaagtaatcagcgatacccagagctcagtataccgagc
acgcccgacttgctgagagtgaagagacgagagagactacagcagagcacctcggctgct
cgtcagacagccactgcaactaccatgccttcacttccttctgctactcaatattctatc
aggaaagaggatgatgatgataggaaacgacagactggcaaggtcaaaacaaaggagaag
gttgcagatgaagctcttgaaaaagtacagttaccatctgttgttttatctgtggacaat
cttcccaaaatagacattgcaattcctcctccaccacgtgctcaaagcttagctacgatt
cagccatcaccagtgggaactggctgcaagttcgagttcgtttctcctcaaactgagcaa
cataatgttattgatcatgattataaatatccagtgacctcttttaagtttagtgctcca
atcagtgaaacaatctgcaaatccagtgacagtaacaaaaaagttgtaagttccggtagt
gtatcctctttgtctaggacatctagtgacaatcttacaagtaacttaaaaagacaaaga
agcaaagatgatggtggtgatgaaacgtcagtgagtgttacaggtgtaagcacaaccaac
ttgtctcacagtttagcagattcctcctcatggaaaccttctccatcgaattttgttaca
tcacaaccagacgttaaacctaactcctcttgtgagagtgatactagcaagagatctgta
aattctagtgacaatcaatgggaatgttctggatgtaaaaacaaaaatctgtttagtatt
gaagtgtgtactgcatgcaaaacaaagaaaaactcaaaaccgattgatacaattaaaaat
aatgtcaaaccttcaaccacatcagggtttggtgacttgtttaagaaacctgttggcaca
tgggaatgttcaacttgcatgattcaaaataaaaatgatgcagtaaagtgtgtcgcttgt
gaatctgcaaaacctgttgacgaagaaaaatgtaaatctgttcctatttcagcttcaaaa
gccaactcaagtgtagttgcttcacccgtatttggtgccaaagtcactgctgagacaaaa
gcttccacaacagtagtatcgggctttggtgaaaaatttaagaagccggctggctcctgg
gattgtgaagcctgtatggtcactaacaaaaatgaagatttgagttgtgttgcttgtagc
acaccaaaagctgataaaaaaacaggtaacacacctaaaacagaaataaaggcggagaca
aaaccatcaggctttggtgacatgtttaagaaacctctgggatcgtggacttgcaatgaa
tgctttgtgtctaatggagcagacgaagttagttgtgtggcttgtcagactgttaaacca
ggtgccaccttaccaaagtcagaaatctccactcctaagttttcatttggaatacccact
tcagcagcagttggtaataaagaagtaagttctacatttaaatttgggattgttaatgat
gagcaggcaaaatcaacaccaagcacatctttcattatgccaaaatccagttctggcaat
gatcttgaatccaaagctccagtttcatctcaggtcttttcatttggtgtaccaaaaact
gccgaaacggatgagaataaaagtggagttacaactagtactcctaaaccagttttccag
tttgggtctgcaaaacaaaatgaaccagaaccaaaattaccatttggaagtgtaacaaca
accaaaccaaatacgtctgacggtgcatttggaaatgctgggaaaacaacagataaagaa
gtaattaaagaaacagcaccagtgaaatcaagcattgaactgggtattacaccgagtaca
gtagtatcttcaatacctagttctaatgtagttgatagtgaaaaggcagcaacacctgca
ttaggtgaaaaatctcttaccattgctgataaaatatctaccacaaaaccgatgtttaca
tttaacacaaacaaagttactggtagcctaaatgcgactgataaacctaatgaaggaagt
ttaaatccaacttttatgtttgggaagaaggagaattcggacaatgttgcaacaaccgta
ataacgaatccaattgctgtaagtgcacctgtcaatgtgttcaagtttggagaaaccaaa
actatcgcttcaagtgttgggtcggactcttcatcctctgtaaacactcagcccagtttt
acagctcctaaagcaaataacatattcacttttggctcaagtatagaaaaaaaagaagca
aattttggaacttctgccaccaaagaaactccatcgactaatacagtgactttgccatct
aatgagaataaaccggtattcggttcttttggcacgacatccaccccatcaccagcgttt
gggagtaacaatgtctttggaagcagtagctttggcagtaaagatcagcctaaccctttt
gttcctcaaacaacgtccaatgtttttggaactacccaaactacaaatgcttcagctaca
agtaccttttcagggtttggccagacaaatgctaatgctttccaaaatgcctctcaagac
aacaagtcttcagctgtttttacatttggatcagcatcaacatcttccaaggaatcagca
ccatcaggtggtggttttgttttcaatcctgtcatggagaaaagagccgagccagcattt
ggtttctcaggaaatcaatcaaatccctcagcaccagtgtttggatttaacagtacctca
tcagcttcatcgacatccttcaactttgaaccaaaaccttttggttcgggaataactccg
tttagtggaacaagtgaggctcctgctccagtttttggaacacctgctctacaacaggtg
actccggcgtttggagaacaaacaaatccaaaccctgtgtttgcttttggatcacaaccc
tcacagacacctgccacttcagtgttcgagtttggatctgcccagcagcaggccacaccg
atagctcctgcaccctctactacatttgtgtttggggcaacaccaacagtcgctacaacc
gaccccaaccccatcctttga
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