Homalodisca vitripennis (glassy-winged sharpshooter): 124359238
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Entry
124359238 CDS
T09217
Name
(RefSeq) UV-stimulated scaffold protein A-like
KO
K23720
UV-stimulated scaffold protein A
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
124359238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hvi03400
]
124359238
DNA repair and recombination proteins [BR:
hvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
124359238
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
TraV
HisG
Motif
Other DBs
NCBI-GeneID:
124359238
NCBI-ProteinID:
XP_046667780
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All DBs
Position
4:44317993..44354796
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AA seq
659 aa
AA seq
DB search
MSSNIKKIKGLNNKKSVIKIYDDKLSQELADIIQEITHTGEKTLPPTDLKKLKTICKQSD
KYVKEAYDLLTKHLEEKHAEVRLSAFQICDEIFRRSHCFRDQLILNLETVVKLTAGKDLP
PPVHVAQQLKRFALTTIHEWNTIYGKQYKKLAIGFNYLRQVEKIDFTALNLLDTATSAKQ
QELKRRQEAINRERIKKVLVEFKEKEADIIATLTSLSNSINLLLPHPDDFFITDNDDRND
AEPLPTTSHGESQTGGGDSDDNSQDVSFREVGMINTKHSIQLHLMPCSEACVVETPENAI
IIENAQEYARLISTKYLPSVKAWLEVLSKSPEEGEDQRRLIELRGELEDVMFKYGRMTFK
YADYVSSDSELEEVPDVQTDKLTTVFNIEDPSTWSIVSKEEAVGDPTSLQTRLASAKKSE
NDPGPSTSTGSQSVSDRKQKLLALAPKLPFDVDLYHWEDDKLPVPTMIPNSTEGHRFWLG
SESCMDELPVPEGSAALRTRVIEFTGNFSPVSHSCRVRLPSGKLCPRRDRLKCPFHGEIV
PRDENGVCIDPKDAMRIQKLQEKRQQEKPDWQDPKLLAEIKRTTGIDLKMPEKGKRKKRK
KEYPGLTDLKKIENTVTKRLESKIFKKSVMRKVSSAMDRIDQRKFQDKYGDQFQYFYNS
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctaatataaaaaaaattaagggtttaaacaataagaaatctgttattaaaatc
tacgacgataaattaagtcaggaactggcagatataatacaagagattactcatactgga
gagaaaacattaccacctactgatttgaagaaacttaaaactatttgcaagcaatcagac
aaatatgtaaaagaagcttatgatctcctaaccaaacacttagaagagaagcatgcagag
gtccgactaagcgcctttcaaatatgtgatgaaatattcagacggtctcattgtttccga
gatcaactcatccttaatttggagacagtagtgaaactaacagctgggaaggacttgcca
cctcctgttcatgtggctcaacagctgaagcgttttgctctcactactattcatgaatgg
aacacaatatatggaaagcaatacaagaaactagctattggattcaactatctacgtcaa
gttgaaaagattgatttcactgctttgaacttattggacacagctaccagtgcaaaacag
caagaactcaaaaggcggcaagaagctatcaatagggaaagaataaaaaaggtgttagta
gaatttaaagagaaggaggcagatataatagcaacacttacttcattgtcgaactccatc
aacctattactacctcacccggatgatttctttatcacggataatgatgaccgaaatgat
gctgagcctctgccaaccacatcacatggtgagagccagactggaggcggtgactctgat
gacaattcgcaagatgtgagctttcgggaagttggaatgatcaacactaaacattctata
cagctacacctcatgccttgttcagaagcatgtgtggttgagactcctgaaaatgctata
ataatagaaaatgctcaagaatatgcaaggctgattagcaccaaatacctgccatcagta
aaagcctggttggaggtgctctccaaatcaccagaagaaggagaggatcagagaagattg
attgaattgagaggggagctggaagatgtgatgtttaaatatggacggatgacattcaaa
tatgcagactacgtgtcatcagactcggagcttgaggaagttcccgatgtccaaacggat
aaattgaccacagtatttaacattgaggatccctccacatggagtattgtttccaaggaa
gaagcagttggagatcccacttctctacagaccaggttagctagtgccaagaagtctgag
aatgatcctggaccatccacatccactggaagccagtccgtgtcagatcgtaagcaaaag
ttgttggctttggctcccaaactgccgtttgacgtggatctctatcactgggaagatgat
aaattgcctgttccaactatgattccaaatagtaccgaaggacacagattctggctgggg
tcagaaagttgcatggatgaactaccagtgcctgaaggctctgctgcactccgaaccaga
gtgatagagtttactggcaacttctcaccagtctctcatagctgcagggtgcgtttgcct
agtggcaaattgtgccctcgtcgtgacaggcttaagtgcccatttcatggtgaaattgtt
cctcgggatgaaaatggtgtatgtattgatccaaaagatgcaatgagaatacaaaaactt
caagaaaaacgacagcaagagaaacctgattggcaagatccaaaactgttggcagaaatt
aagagaactacagggatagatttgaaaatgcctgaaaagggtaaaagaaaaaagagaaaa
aaagagtatcctgggctaacagatttgaaaaaaattgaaaatacggtgacaaaaagattg
gaaagtaagattttcaaaaaatctgtgatgagaaaagtttcttctgcaatggatagaata
gatcaacggaaatttcaagacaagtatggagaccagtttcaatatttttataactcatag
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