Homalodisca vitripennis (glassy-winged sharpshooter): 124359469
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Entry
124359469 CDS
T09217
Name
(RefSeq) general transcription factor IIH subunit 3 isoform X1
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03022
Basal transcription factors
hvi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124359469
09124 Replication and repair
03420 Nucleotide excision repair
124359469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvi03021
]
124359469
03400 DNA repair and recombination proteins [BR:
hvi03400
]
124359469
Transcription machinery [BR:
hvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124359469
DNA repair and recombination proteins [BR:
hvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124359469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
P-loop_TraG
Motif
Other DBs
NCBI-GeneID:
124359469
NCBI-ProteinID:
XP_046668186
LinkDB
All DBs
Position
4:complement(68366591..68410512)
Genome browser
AA seq
308 aa
AA seq
DB search
MPNSQDAVSATCLQETETSLLVIVVDVNPAQRILVEHRHKLTHCLDAIIAFANSHLMLCT
TNKLAMLACNAESSEFVFPDENASVVTCRQQDGQYELFTHTERTIRQGLQRFVLDSTRHT
HTQTLVAESLLAGAFTMALCYIHRLERELAAGIKMNSRILVVTGSGDSASQYMNYMNVFF
TAQKHNIILDVCSLDQNLGLLQQGCDITGGLYLKLTVARLPGLLEYLLWVFLPEPPIRKK
LVLPPPVKVDYRAACFCHRQLVDIGYVCSVCLSIFCKFSPICTTCHAVFRTPGALPVKPK
KKKPKMSL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcctaactcccaagatgcagtatctgcaacctgtcttcaagaaacggaaactagcctg
ttggtcatcgtagtcgatgtaaatcctgcacaacgtattcttgtggagcaccgtcacaaa
ctgactcactgcttggatgccatcatagcctttgccaactcccacttgatgctatgtact
accaacaagctggctatgctggcctgtaatgctgaaagcagtgaatttgtcttcccggac
gagaatgcttcagtggtgacgtgccggcagcaggatgggcagtatgagctattcactcac
acagaacgcacaatacgccaaggcctgcaacggtttgtgttggatagtacacggcatacg
catacacagactctggtagcagaatccctgctagcaggcgcatttactatggctctctgt
tatatccacaggctggagagagaactggcagctggaatcaagatgaattctcgtatcctg
gtggttacgggtagtggagacagtgcatcccagtacatgaactatatgaatgtcttcttt
actgcccagaaacataacattatcttagacgtttgcagcctggaccagaacctgggattg
ctacagcagggatgtgacataacaggaggactctacctgaaactgacagtggctcgactc
cctggcctcttagagtatcttctgtgggtcttcctgccagaaccacctatcaggaagaag
ctggttctgcctcctccagtcaaggtcgactacagagcagcatgcttctgtcaccgacag
ttggtagatatcggctacgtctgctccgtgtgtctatccattttctgcaaattcagtccc
atctgcacaacatgccatgcggtgtttaggactccaggagcattgcctgtaaagccaaag
aaaaagaaaccaaaaatgagtttgtaa
DBGET
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