Homalodisca vitripennis (glassy-winged sharpshooter): 124359708
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Entry
124359708 CDS
T09217
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvi03021
]
124359708
Transcription machinery [BR:
hvi03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
124359708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
GatB_Yqey
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
124359708
NCBI-ProteinID:
XP_046668625
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Position
4:complement(87663405..87694480)
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AA seq
784 aa
AA seq
DB search
MSQPNITCTVCGGTEFTVDAGFFFCLECHTQSQDVREEVFDDFFGNQKFATKVLTKATPV
PASNQNVKLTSWEVLNYVMKGLVDELINLGAKPELKIVTLQLWASYLCRLEIAFTSVDVE
RKPKLGYAFKNSDAEIIYGVTKPQLREKSWRSRSKSSSAASSTSRAESNTSVNKTLSRRS
IMLRLAHRKKSLASAEYQTLTQETMQSNNQTLEDLSSTSATSVAPKRIKVTAHTKSLLNS
SCASSTDCDEERTVRRRRARSEVQSLRNVTTAKVVAIVNVALALTKQDIQVSDFLRWVEE
GHISLKTSRVFLPGDITVDGNVQRMIELDHLSYIKCQNLITGICNELEIGELPPPRLREL
ADRYCLELQLPDEVTDLVKQLLLLSTSSHGLVKKNDVHTYRYSEVQVMSVIVVVLKLLFS
LDDCTEFQLSHTAAQINRVIGVENISRRQFVFSEWMQYVECRKATVSSYHWPTRSAVYGK
AVDRDPQLFLHHLDQTELNASQPVKRQYEALNKVWMESLRQCLQRLNEQPSQRALVKFPP
SLTPLLTCTQYLLTQHAELVAPVAHVLEQDFTSQSLDYIIHPDRCITLGLTHGLNIIQQR
GSAATFLVDKIKPGNRDSTVLPRYKINEVNVTMKIVENLKQAGNLSCNKTAKSADIDRGK
LSELVSDDTDEEENDDESGVFEGPQIHDVTTSHSTVELFNTGAQYWFCHTRLDKNSLSLD
EFEEFAMNSFPSSFLWLLKECSRMICVPIKDIYANIVSLEKNYKYILNETHFLACHSRNK
RKRN
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcccaatattacatgtacagtttgtggaggtacagaatttactgttgatgct
ggatttttcttttgtctagaatgtcatactcagtcacaggatgtcagagaggaagtcttt
gatgacttctttggaaatcagaagtttgctactaaagtattgacaaaagcaacaccagta
ccagcttcaaatcaaaatgtgaaactaacttcgtgggaagttttgaattatgttatgaaa
ggattagtcgacgagctgatcaacctgggagccaagccagaactgaagattgttacacta
caactgtgggcctcttatctatgcaggctggaaattgcgtttacttcagttgatgttgaa
cggaaacctaaacttggctacgcttttaagaatagtgatgcagaaataatttatggagtt
acaaaaccacagttaagagagaaaagctggagatcgagatcaaaaagtagttcagctgca
agtagtactagtcgtgcagaatccaacacttcagtgaacaaaacattgtcacggagatcc
ataatgttgagacttgcccatcggaagaaatctcttgcttctgctgaataccaaacatta
acacaagaaacaatgcagtcaaataaccaaactttagaagatttgagttctacatcagca
acaagtgtagctcctaaaaggataaaggtcactgcacacactaagtcactgctgaactct
tcgtgtgcaagttcaactgattgcgatgaggaacgcacagtacgaaggcggagagcaagg
agtgaagtgcagtccctacgtaatgttaccacagccaaggttgtggcgatagtcaatgta
gcacttgctctgacaaagcaggacatccaagtctcagattttttaaggtgggtggaggag
ggacacatatctttgaagacctcaagagttttcctgcctggtgacatcacagtggatggt
aatgttcagcggatgatagaactggatcatctgtcgtatatcaagtgtcagaaccttatt
actgggatttgcaatgagctggagattggtgagctgcctccacctagactgagggagctg
gcagacagatactgtcttgaactacaactgccagatgaggtaacagatcttgtcaagcag
ttactgttgttatctaccagctcccatggacttgtgaagaagaatgacgtacacacatac
aggtacagcgaggtgcaggtgatgtcagtcattgtagtggttctcaagttgttgttctca
ctcgatgattgcacagagtttcaactgtcacacaccgctgcacagattaatagagtgatc
ggtgtggagaacatatccagacggcagtttgtattcagtgagtggatgcagtatgtggag
tgccgcaaggccactgtttccagctatcactggcctaccaggtctgctgtctacgggaag
gcggtggaccgggaccctcagttgttcctgcaccatctggaccagactgaactcaatgca
tctcaacctgtcaagagacaatatgaagcgcttaataaagtttggatggaatctctgagg
cagtgtctgcaaaggttaaatgagcagccatcccagagagccttggtcaaatttcctcct
tcgctgactcctctgctgacttgcacccaatatctgctgacccaacatgctgagctagtg
gccccggtcgcacatgtgctggagcaggatttcacctcacagtcactggattacatcata
cacccagatcgttgcattaccttgggactcacacatggcttgaacatcatccagcagagg
ggatccgcagctacattcttagtagataagatcaagccaggaaacagggactcgactgtt
ctccctcggtacaagataaatgaggtcaatgttacaatgaaaattgtagaaaatttgaaa
caggctggcaacttgtcctgtaacaaaaccgctaaaagtgcagatatagataggggtaaa
ctatcagaacttgtatctgatgatactgatgaagaagaaaatgatgatgaaagtggagtt
tttgaggggcctcagattcatgatgttactacctcccattctactgtggaactgttcaat
actggggctcagtactggttctgtcacacaagactggataaaaacagcctttcattggac
gagtttgaggaattcgccatgaactcattcccttcttcttttctgtggttgttaaaggaa
tgttctagaatgatatgtgtgcctataaaagacatttatgcaaatatagtctctcttgaa
aaaaattataaatatattttgaatgagacacactttttagcctgtcatagtagaaataag
cggaagagaaattag
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