Homalodisca vitripennis (glassy-winged sharpshooter): 124359871
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Entry
124359871 CDS
T09217
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124359871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvi04121
]
124359871
Enzymes [BR:
hvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124359871
Ubiquitin system [BR:
hvi04121
]
Ubiquitin ligases (E3)
HECT type E3
124359871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WWE
HECT
Motif
Other DBs
NCBI-GeneID:
124359871
NCBI-ProteinID:
XP_046668934
LinkDB
All DBs
Position
4:complement(104529115..104645555)
Genome browser
AA seq
1797 aa
AA seq
DB search
MYFCDGVLPMKFVSQITKRRMTTRQSNEDGLGGGEKKRGRGRPCKRHHEEDSGPIPNKCP
RANSSDKSVSCEVNRRNSQSPSTSSRSRTRSFSKSLEAEPIISQVTTAASTNSIENSVEN
HTGNHSGGKKKKSKKRNSKSPKQPAKITISVPVPATTRQGRHSKDKKRDHSEESIQSTAV
IQAESEASTSKSKKKRDSSTSGRSNKANCLIRKQYPLRSHSRLPDAPTLISTETLGGSQW
SGVSSGVAPASLRRSARSSTTGSCTSTSRRSSRGGVKLALECSGGAMSGRDDATPTPPTP
TPASTAPTDHDNAQSAPAVSGPSSAERDSESDDSEVGRLQALLEARGLPPHLLGALGPRM
QHLLHRSMGASSSTKAQQLLQGLQASGDEGQQLQAVIEMCQMLVMGNEDTLAGFPVKQVV
PALITLLTMEHNFDMMNHACRALTYMMEALPRSSAVVLDAVPVFLEKLQVIQCMDVAEQS
LTALEMLSRRHSKAILQARGVSACLMYLDFFSINAQRAALAITANCCQNLHAEEFHLVSQ
SLPLLASRLTQQDKKSVESVCLVFSRLVDSYQNDTSKLEEIASTELLTNLQQLLVVSPPV
ISTGTFITVLRMLSVMCSNCPQLAVILLHQNIADTLCYLLTGLTADAIGEEVELISRSPQ
ELYEMTCLIAELMPVLPTEGLFKVDILLERASPQTQADTVTWQWRDDRGLWHPYNAVDSR
IIEAAHQSGEDEMSLSTLGRTYTVDFHSMQQINEDTGTSRPVQRRVTPPHPPSTPSTPSS
DLVTNNNSSNFFPEGDNLSSDAAAFVRTLFNVLYEVYSSSAGPAVRCKCLRAILRMVFYA
SPELLQEVLKTQVVSSHLAGMMASQELRIVVGALQLAEILMHKLPNVFCIHFAREGVMHQ
VKQLADPHVPISASPPKVNPPTPTISSAVNHGAGPSTSNGAVSSLSGGSHSASLELRRLS
QHQDLLLSVDEARSNSPHLDVLKRKRTSKRGSTASRKTRQEHLDLQDQLQDLFSKATSSL
GSGSRSRLYGSSSSKTSSFLASLNPARWGRTDRHLHKENSSLSKCASNANLSAGNREKAR
LWVRERAQCFVDAYKNRSDVPVTVIVRLTEAINQLDSQGQGNDVETLEALNQLKEIVMAS
DISPFEVNHSGMIHSFLQFLTRASDSNRDDRLRAFLHVFANCPLDGCSSICDINGSCLSA
LVTKLSGCVSQLEQFPVKVHDLPAGTGSTTALKFFNTHQLKCHLQRHPDCTTLKQWKGGT
VKIDPLALVQAIERYLVVRGYARIRDKESAESDDDNSEEDIDDTLAAVVISQGAARHKLQ
FVIGEQVLPYNMTVYQAIRQFSPAAGNDQSETDTDSEAPLGSANIWVQTHTVYYRPVPED
DNCNAKVGSSLVSPRKGKSSIKVTPFRRKPDELWTEGVVPASKSPLDAFLVPKLPVTVSI
HDQSLSVLCLLRVLHALNRFWYTLYNGFDAKPILPQQEFVNSKIAAKASRQLQDPLVIMT
GNLPSWLQQIATVCPFLLPFETRQLLMYAIAFDRDRALQRLLDCSPELATSDSQERVTPR
LDRRKRTVSREDILKQAEAVIQDLASSKALLEVQYENEVGTGLGPTLEFYALVSKELQRS
DLELWAGSHSGTHVFSPSGLFPSPLGRTTKVSHTVRIRSKFRFLGKFMAKAVMDSRMLDL
PLSVTFYRWLLGEENTLGLADLAHVAPDVHRTLVKLQAVVHRKQTLIANQNLTIEQRNKQ
LEDLGLDGCSIEDLGLDFTLPGYPAIEMRRGGKDIPLTIHNLEEYIKVILTINICVW
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgtacttctgtgatggtgtgttacctatgaagtttgtgtcacaaatcactaaaagaaga
atgactactagacaaagtaatgaagatggtctgggagggggagagaagaagagaggaaga
ggaagaccctgcaagcgccatcacgaggaagactcaggacctattcccaacaagtgtccc
agagccaactcgtctgataagtcggtctcctgtgaagtcaacagacgcaacagtcaaagt
cccagcaccagcagccgaagccgtactcgttccttcagcaagtctttggaagcagaaccc
attattagtcaagtaacaacagctgcatccactaattcgattgaaaattcagtggagaat
cacacaggaaatcacagtggtggaaagaagaagaaatctaaaaagaggaactctaaatca
ccaaaacagccagcaaagataacaatctcagtacctgttccagctactactaggcagggg
cgacacagcaaggacaagaaacgagatcatagtgaggagagtattcaaagtactgctgtc
attcaggctgagtctgaagccagtacaagtaagagcaagaaaaagcgagactctagtaca
tcaggacgcagcaacaaagcgaactgtctgatacgcaaacaatatcctctgcgcagtcat
tctcgactgcctgacgcacccaccctaatatccaccgagacactgggcgggagtcagtgg
agcggagtgagcagtggggtggcgccagcgtctctgcgacgcagtgctcgcagttccacc
acgggctcctgtacatctacaagccgtcggtcgtcgcgcgggggtgtgaagctggctctg
gagtgctctgggggtgccatgtcaggccgcgacgatgccactccgacccctcccactccc
acccccgcctcgaccgccccaaccgatcacgacaacgcacagtctgcaccagcggttagt
gggccaagcagtgctgagagagacagtgagagtgatgacagtgaggttggtcggctgcaa
gcccttctggaggcgcgagggttgccccctcacctgctcggagctctagggcccaggatg
caacatctactacaccgtagtatgggtgccagttcttctacaaaggctcaacaattgctg
caagggctacaggccagtggcgatgagggccaacagctgcaggctgtcattgagatgtgt
cagatgttggtcatgggcaacgaggacaccctggcaggattccctgtcaagcaagtggta
ccagctctcatcaccctgctcaccatggaacacaattttgacatgatgaaccatgcctgc
cgagccttgacgtacatgatggaagcgctgccccgctcatctgcggtggtcctggacgct
gtgccggtgttcttggagaagctgcaggttattcagtgtatggatgttgccgagcagagt
ctcactgccttggagatgttgtcccggagacatagcaaggccatcttgcaagcgcgtggg
gtgtcagcttgcctgatgtatctcgatttcttcagcattaatgcccagagagctgccctt
gcaatcacagccaactgctgccagaacctgcatgctgaggagtttcatctggtttcccag
tccttgcccctcctagcctctcggcttacgcaacaggataagaagagtgtggagagtgta
tgtcttgtgttcagccgacttgttgacagctatcagaatgatacaagcaagctggaagag
attgccagcactgaattgctcacaaaccttcagcaacttcttgtggtgtctcctcctgtg
atcagcactggtacgttcatcacagtgctgcggatgttgtcagtgatgtgcagcaactgt
cctcaactggctgttatcttgcttcatcagaacatagctgatactttgtgctacttgctc
actggcctcactgccgatgccattggagaagaggtggagctgatatcgcgtagtccccag
gagctgtacgagatgacatgtctgatcgcagaattgatgccagtgttgccaactgaaggg
ttattcaaggtggatattctgttggagcgagccagtccacagactcaagctgacactgtg
acatggcagtggcgtgatgatcgtggcctatggcacccgtataatgcagttgactctagg
attattgaggctgctcatcaatctggagaggatgagatgagcctatcaacgctgggtcga
acgtacactgtggatttccattccatgcaacagattaacgaagatactggcacgtccaga
cctgtccagcggcgagtaaccccacctcaccctccctccactccctctactccctccagt
gatctggtcaccaacaacaacagtagcaatttctttccggaaggagataacctcagcagt
gatgccgctgcgtttgtacgcactctcttcaatgtgctgtacgaagtgtacagtagctca
gcaggaccagctgtccgttgtaaatgcctacgtgctattcttagaatggttttctacgct
tcaccagaacttcttcaggaagttctcaagactcaggtagtttctagtcatctggctggc
atgatggcctcacaggagctgcgtatagtcgttggagctctgcagctagcagagatcctc
atgcacaagttgccaaatgttttctgtattcatttcgcccgggaaggagtaatgcatcaa
gtaaaacagttggcagatcctcatgtgcccatttctgcctccccacccaaagttaaccca
ccgacccccactatatcttcagctgtcaaccacggcgccggaccttccacttctaatggt
gctgtttcatccttgtcaggtggcagtcactcggcatccctggagctccgaaggctttcc
caacaccaggacttgctactctctgtcgatgaagctcgctcgaacagtccccatttggat
gtgctgaaacgcaaacgtacaagcaagcgaggatctactgccagtcgtaagactcgccag
gaacatttagacctacaagaccagctacaggaccttttctctaaagcaactagtagccta
gggtcaggcagcaggtcaagactgtacggcagtagcagcagcaagaccagtagtttcttg
gctagtctcaaccctgcccgctggggtcgcactgatagacacttgcacaaggagaactca
tcgttgtctaagtgtgccagcaatgcgaacctgagtgctggcaacagggagaaagctcgt
ctgtgggtgcgggagagagcccagtgcttcgtggatgcctacaagaacagaagtgatgtg
cctgtaaccgtaattgtgagactgactgaagcaatcaaccagctggattcccagggccaa
ggcaatgatgtggagacactagaagcactaaaccagctgaaggagatagtgatggcgtct
gatatctccccttttgaggtgaaccacagtggaatgatccattcctttctacaatttctg
actcgggcctcggacagtaatcgagatgatcgtctacgggcctttctgcatgtttttgcc
aactgtccactggacggttgcagttctatctgtgatataaatgggagctgtctgtctgct
ctggtcaccaaactcagtggctgcgtgtcccagttggaacagttccctgttaaagtacac
gacttgcctgctggcaccggtagtaccactgcgctcaagttcttcaatacccaccaacta
aagtgccacttacaacgccaccctgactgcaccaccctaaagcagtggaagggaggcaca
gttaagattgatcccctagcgcttgttcaggccatagagcgctatcttgttgtcagggga
tatgctcgcatcagagacaaggagtcagcggaatcagatgatgataacagtgaagaagat
atcgatgacactttggctgcagttgtgataagccaaggagcagctcgacacaaactacag
tttgtcatcggcgagcaagtgttgccatacaacatgacagtgtaccaggccatccgacag
ttctctccggcagctggcaatgaccagtccgagactgacactgatagtgaggccccactt
gggagtgccaacatctgggtccagactcacacagtctattacaggcctgtaccagaggat
gacaactgtaatgcaaaagttggttcatcattggtatcccctcgcaaaggcaagtccagc
atcaaagtcacaccattccgcaggaaaccggacgagctttggacagaaggagtagtgcca
gccagcaagtcacctctagatgcctttcttgtgcccaagctgcctgtcacagtctctatc
cacgaccaatctttgtcagttctttgcctgttgagagtcctgcatgcgctcaaccgcttc
tggtacactctatacaacggatttgacgcaaaacctattcttccccaacaggaatttgtc
aacagcaagatagcagcaaaggccagcagacagttacaggatcctcttgttatcatgaca
ggaaacttgccctcctggcttcagcagattgcaacagtttgtcccttcctgctgccattt
gagactcggcagctactcatgtatgccattgcatttgatcgtgaccgcgctctgcagcgc
ctgctggactgctcacctgagcttgccacctccgattctcaggagagagtgacgccccgc
ctggatcgccgcaagcgtacggtctcgcgtgaggacatactcaagcaggctgaagcagtc
atacaggacctggcttccagcaaagctctcctagaagtgcagtatgaaaatgaggtggga
accgggttgggcccgaccctggagttttacgccctggtctccaaggagctgcagcgctct
gacctggagctgtgggctggcagccattctggcactcatgtcttttcaccttcaggcctg
ttcccttcacccctcggtcgaaccaccaaggtatcacacaccgtccgtatccggtccaaa
tttcgtttcctaggaaaatttatggccaaagcggtcatggattcaagaatgctggatttg
cctctgagtgttacattttaccgttggctgttgggagaggagaacactctagggttagca
gacttggctcatgtagctccagatgttcatcgcactctggtcaagttgcaagctgttgta
catcgtaaacagaccctgatcgctaaccagaatcttaccattgaacaacgaaataaacag
ctggaagatttgggtctggatggatgcagtatcgaagacctaggtctagacttcacgttg
ccaggctacccagccattgagatgaggcgtggaggcaaagacattccactcactatacat
aatttagaggaatatattaaggtaatattaaccattaatatttgtgtatggtaa
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integrated database retrieval system
