Homalodisca vitripennis (glassy-winged sharpshooter): 124360139
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Entry
124360139 CDS
T09217
Name
(RefSeq) nuclear pore complex protein Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124360139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvi03019
]
124360139
Messenger RNA biogenesis [BR:
hvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124360139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Rootletin
Motif
Other DBs
NCBI-GeneID:
124360139
NCBI-ProteinID:
XP_046669447
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All DBs
Position
4:complement(128292435..128312476)
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AA seq
595 aa
AA seq
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MAFNVSGTPVFGGQATSTPFGVGSTPANKSIFGQSNISFGTPQGIGTTPSFNLGSTTTTT
GGGFGFSTTAPTSTSLGGFGGFGSTATTTTSGFGTFSGFGSTATTSAAPTFGFGTGTTSG
TQPLFSGFGQNQTLNTSTGFGGFGGFGNKPLGTQQPTTFSGFGQTTGLGSFGQAQTQQTQ
QPAQQHPLEAIYRSVLQCNIFNDERDQVVASWNLLQALWGVGKGYYDRNLPPAEYTQENP
LCRFKAVGYSRKPTTEAKDGIVSLVIKKKESDIRNEEAQLISSINNILGNKPNLTTTIEA
IKAMSDEKSQVLFYIQEKAANGVTKRIQNTEVVTYLRTQGPSQTLTNMGVENVFCFQGPD
QDQIKEYLENPPSGIDSRLWKQAQLDNPDPDKLLPVPIVGFNDIRWRAKCQENETKVHTA
VLDKISNVIVELKRQNSETIAKIAEYKQRVMDLEHRVLKVLVKQEATRNVGIALRPEEEA
LRSQLEALHSQVNTPAQFKGRLNELLALMRMQRQESSQGPTERYTMNPEAQEEIHQFLLE
FLFAMQQVVQTVNNDLKDLKTMSDGTSSLMREFGPFLNMLVIYYCCNARVLLLNL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcattcaatgttagtggtacaccagtgtttggtggtcaagcaacttcaacaccgttt
ggggtaggatcgacaccagcaaataaatctatttttggtcagtccaacatctcatttgga
accccacaaggaattggaacaacaccttcatttaatttaggatcaacaacaacaacgacg
ggcggtggatttgggttttcaacaacagctccaaccagcacttctctaggtggatttgga
ggatttggttctactgctaccactaccaccagtggttttggtacttttagtggttttgga
tcaactgctactacttctgctgctccaacatttgggtttggcactggcaccacttctggc
actcaacctttgttctcaggattcggacagaatcaaactttgaacaccagcacaggtttt
ggaggattcggaggctttggtaacaaaccactagggactcaacagccaacaacattttcc
ggtttcggtcaaacaacaggactgggatcttttggtcaagcccaaacccaacagacgcag
caacctgcccaacaacacccactagaggccatctacaggtctgtgctccagtgtaatatc
ttcaatgacgagcgggaccaagtagtagccagctggaaccttctgcaggctctctggggt
gtcggcaaaggatactatgaccgcaatctaccccctgcagagtatacgcaagagaaccct
ctatgtaggttcaaggctgtgggctacagccgcaagccaaccacagaggctaaggacggc
attgtgtccttggtcatcaagaagaaggagtcggacattagaaatgaagaggcccaactg
atttcaagtatcaataacatattgggaaacaaacccaatctgaccacgaccattgaggca
atcaaggcgatgtcagatgaaaaatcccaagttttgttttatatacaagaaaaggctgcc
aatggagtgacaaagcgtatccagaatacagaggtggtgacctacctgaggacccagggg
cccagtcagaccctgacaaacatgggggtggagaatgtcttctgcttccagggtccggac
caggatcagatcaaggaatacctagagaaccctccatccggtattgactccaggctgtgg
aaacaggcacagctggacaacccggatcctgacaagttattgccagtgcccattgtaggg
ttcaatgacatcaggtggagagctaagtgccaggagaatgagaccaaggtacacacagct
gtattggacaagatctccaatgtcatcgtggagctcaagaggcagaactcggagactata
gcaaagattgcagaatataagcagcgtgtgatggacttggagcacagagttctcaaggtt
ttagtaaaacaagaagctacacgaaatgttggtatagcattgaggccagaagaagaagcc
ttgcgcagtcagcttgaggcgctccactcacaagtcaatactccagcacagtttaagggc
cgtctcaatgaactactggccttgatgagaatgcagagacaagagtccagtcaaggccct
acagagcgatatactatgaatccagaagcacaggaagaaattcatcagttcttgctagag
ttcctgttcgctatgcaacaagttgttcaaactgtcaacaatgatttaaaggaccttaaa
actatgtcagacgggacctcttcactcatgagagagtttggtccatttttaaacatgtta
gtcatatattactgctgtaatgcgcgagtgctactactaaatctttga
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