Homalodisca vitripennis (glassy-winged sharpshooter): 124360183
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Entry
124360183 CDS
T09217
Name
(RefSeq) DEAD-box helicase Dbp80-like isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03013
Nucleocytoplasmic transport
hvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124360183
03015 mRNA surveillance pathway
124360183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvi03019
]
124360183
Enzymes [BR:
hvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124360183
Messenger RNA biogenesis [BR:
hvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124360183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
124360183
NCBI-ProteinID:
XP_046669525
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All DBs
Position
4:complement(132257232..132290652)
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AA seq
491 aa
AA seq
DB search
MSSLCTDWAKEAAQQEKLLQRVEKINISPGEQNSQPKQPSQQKMPAEGSSKPGSVSSSED
DSVELSKAEASLLQKVVRKGLIVSKHDIEVQRKDPTSPLYSVKTFEALHLKPQLLKGVYE
MGFNAPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDAKKSYPQVLCLS
PTYELAIQIGDVAIKMGQFCPEIKIRFAIRGEEVPKGTILTEHIIIGTPGKVVDWALKFR
FFDLSKIRVFVLDEADVMIATQGHQDQSFRIRKALTEQCQMMFFSATYDEHVMEFAEAIV
TNPVTIRLKREEESLDNIKQYYVECKNQDAKYAAIANIYGVATIGQAMIFCHTRKTASWL
SEKMSKDGHAVALLSGELTVEQRIAILDRFREGKEKVLITTNVLARGIDIEQVTIVVNFD
LPIDQAGNADCETYLHRIGRTGRFGKAGLAINLVDGPQSRRVLIQIEEHFGKKIVRLNTD
DVDEIEKLGNE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtttatgtacagactgggccaaagaagctgctcagcaggaaaaattactccaa
agggtagagaaaataaatatatctccaggagaacaaaattctcagcccaaacaacccagc
cagcagaaaatgcctgctgaaggatcgtcaaaacccggtagtgtcagcagctcagaggat
gattctgtagagctgtccaaggcagaggcttcgttacttcagaaggttgtaagaaaagga
ttaatagtctcaaaacatgacattgaagttcaaagaaaagacccaacttctccgttgtat
tcagtaaaaacatttgaagctctacacttaaaaccccaactactcaaaggtgtttacgaa
atgggattcaatgctccttcaaaaattcaagaaaccgccttacctactttacttgctgac
ccccctcaaaatatgatagcacaaagtcaatctggtactggtaaaactgctgcgttcgtc
ttggctatgctgtcaagagtcgatgctaaaaaaagctacccgcaggtcttgtgtttgtct
ccaacatacgagcttgccattcagattggggacgtggcaataaaaatgggacagttttgt
ccagaaattaagattaggtttgccatcagaggggaggaagtgccaaaaggaacaatatta
acagaacacatcataattggaaccccaggaaaagttgtggactgggcacttaaattcagg
tttttcgatctcagcaagatacgggtctttgtgctggatgaagcagatgtgatgattgcc
acgcaaggacatcaagatcagagtttccgcatcagaaaagcgctgacagaacagtgtcaa
atgatgttcttctcagcaacatatgacgagcatgtgatggaattcgctgaagccattgtg
acgaacccagtgacgatcaggctcaagagggaagaagaatccctggacaacataaagcag
tactatgtcgagtgcaaaaaccaagatgcaaagtatgcagccatagctaacatctacgga
gttgctacgattggtcaggcaatgatattctgtcatacaagaaaaacagccagctggctc
tctgagaagatgtccaaagatggccatgcagtcgcacttctgtctggggagctgacggtt
gagcagagaatcgcaatcctggaccggtttagagaaggcaaagaaaaagtgctcattaca
acaaatgttcttgcgagagggatcgacatagagcaagtaacaatagtcgtgaacttcgac
ctccccatagaccaggccggaaatgcagattgtgaaacatacttgcacaggatcggtcgc
acaggacgcttcggcaaagctggacttgctatcaatctggtagatggtcctcaatcaaga
agagtacttatacaaattgaagaacatttcggaaagaaaattgtacgtctcaacactgat
gatgtggatgaaatagagaaactgggaaatgaatga
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