KEGG   Homalodisca vitripennis (glassy-winged sharpshooter): 124360187
Entry
124360187         CDS       T09217                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit Rpb4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
hvi  Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03020  RNA polymerase
hvi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    124360187
  09124 Replication and repair
   03420 Nucleotide excision repair
    124360187
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hvi03021]
    124360187
   03400 DNA repair and recombination proteins [BR:hvi03400]
    124360187
Transcription machinery [BR:hvi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     124360187
DNA repair and recombination proteins [BR:hvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      124360187
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4
Other DBs
NCBI-GeneID: 124360187
NCBI-ProteinID: XP_046669532
LinkDB
Position
4:complement(132982447..133005678)
AA seq 138 aa
MAAGSIDLLDEDAADLQFPKEFENAETLLISEVHMLLEHRKAQNESAEEEQEFSDVFMKT
LTYTDRFRKFKNKEIIASVRNLLTQKKLHKFELASIANLCPETPEEAKALIPSLEGRFED
EELRQILEDIQTKRSLQY
NT seq 417 nt   +upstreamnt  +downstreamnt
atggctgctggaagcattgacctattagatgaagatgctgctgacttgcaatttccgaaa
gaatttgaaaatgcggagactttgctcatctctgaagtccacatgctgctggaacatcgc
aaggcgcaaaatgaaagtgctgaggaagaacaagagttttctgatgtattcatgaagact
ttaacatatacagatagatttcgcaagtttaaaaacaaagagatcattgcttctgttcga
aacttattaacccagaagaaattacacaaatttgaactggcttccatagcaaatctgtgt
ccagaaacacctgaggaggcaaaagccctaattccaagtttggagggcagatttgaagat
gaagagttacgacaaatcctggaagacattcaaacaaagagaagtttacaatactaa

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