KEGG   Homalodisca vitripennis (glassy-winged sharpshooter): 124360229
Entry
124360229         CDS       T09217                                 
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
  KO
K11807  WD and tetratricopeptide repeats protein 1
Organism
hvi  Homalodisca vitripennis (glassy-winged sharpshooter)
Brite
KEGG Orthology (KO) [BR:hvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hvi04121]
    124360229
Ubiquitin system [BR:hvi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     124360229
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WDR55 Beta-prop_EML TPR_17 TPR_19 Beta-prop_WDR75_1st Beta-prop_EIPR1 ANAPC4_WD40 TPR_6 Beta-prop_TEP1_C Beta-prop_SPT8 TPR_1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N TPR_11 TPR_2 NBCH_WD40 TPR_9 TPR_14 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_HPS5 TPR_16 Beta-prop_IFT140_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 124360229
NCBI-ProteinID: XP_046669609
LinkDB
Position
4:135168954..135209139
AA seq 670 aa
MPHHNVAEFVKRREIDESVRNRLQRKLHVTDSFVQRLGLEKELEGHQGCVNCLEWNSEGR
ILASASDDFQVILWDPFKYRKIQSYQTVHHGNIFSVKFLPGTNDNTLVTGAGDFQVHAMD
VTLKETTQVCTCATGRVKRLATAPQVPFIFWSASEDGAVRQYDLRSPHSCSGDVNNVLVY
LRTHLGHFAETKCLAVNPLRPEILAVGANDPYVRLYDRRMIRLTKIYTSENLHSQRARLA
YPAEPVEVEDNLPKECVQYFVAGHLPVKQKDFKKKFRSLAATYLTFGSKGTDLLLNLGGE
QIYLFDITRKQKPKSFDIPKAAMPKEHCSTSNGYSNGYHTGANGYAVSPGSKKDDKKPAL
PDHVEAMKLTANMLFEKEDYTPAIRLYNEAIQHYSNSPVLYGNRAAAYMKRDWDGDMYAA
LRDCHTTLLLDPNHVKAFFRLARCLNELHWTDKARQCLESFKLRFPNHVNSHACRALEKD
IYLSGISTSEDADSDELDLMKVGESRLLSRISTQEWRWREASYDYDKRFYGHCNTTTDIK
EANFFGSEGQYIVAGSDDGSIYFWDRRNTNNVRILRGDSSIVNCLQPHPSYCLLATSGID
PLVRLWSPRREDVENNHEIRDRDSAATCNQRRMKADPFDVVLMNMGYRVGGANDEANEDG
NTPTYNCHTS
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgcctcaccataatgttgcagagtttgtcaagaggagagaaattgatgagagcgtgaga
aacaggttgcagcgtaaactgcatgtgactgacagcttcgtacaaaggctgggactggag
aaggagctggagggacatcaaggatgtgttaactgtctggagtggaactctgaggggagg
atactggcatctgcatcggatgacttccaagtgatcttgtgggatcctttcaagtaccgt
aaaattcaatcctaccagactgttcaccatgggaatatattttcagtcaagttcctaccg
ggcactaacgacaatacgttggtgacgggtgcgggagacttccaggtgcatgcgatggat
gttacgctcaaggagacgacgcaggtgtgcacatgtgccactggtcgagttaaacggctg
gccacagctcctcaggtgcctttcatcttctggagtgcctccgaggacggagctgttaga
caatatgatctgcgctcgcctcacagttgttcgggagatgtgaacaatgttttggtatac
cttcgaacccacttaggccactttgcggagactaaatgcctggctgtgaatcccctaaga
cccgaaatactggcggtgggtgccaacgatccatacgtccggctctatgatcgtaggatg
atcagactcaccaagatatacacatcagagaatctacacagtcagcgagcccggctcgca
taccccgcagaaccagtggaagtggaggataatctgccaaaagagtgtgtgcagtacttt
gttgccggtcacttgccagtaaaacaaaaagatttcaagaagaaattccggagtttggcc
gctacttaccttacctttggctcgaagggcacagacttgctgctgaatctgggtggcgag
cagatctacttgttcgacatcactcgcaagcagaaacccaagtcctttgatatccccaag
gctgctatgcccaaagaacattgtagtacatcaaatggctacagcaacggataccacaca
ggtgcaaatgggtatgctgtatcaccagggtctaaaaaagatgacaagaagccagcgcta
ccagatcatgtggaggctatgaaactaactgctaacatgttgtttgaaaaggaggattat
actcctgcgatcagactatacaacgaggccatccaacattacagcaacagccctgttttg
tacggtaaccgtgcagcagcatatatgaagagagactgggacggagacatgtatgctgcc
cttagagactgtcacacaaccctactattggatcctaatcatgtcaaggcgttttttaga
ttggcacggtgtctcaatgagttacactggacagacaaagcacggcaatgtcttgagagc
ttcaagttacgatttcccaaccatgtcaacagtcatgcttgtcgtgctctggagaaggac
atctacttatcaggcatttctacttctgaagatgctgattcagatgagctggatctcatg
aaggtgggagagagccggctactgagtcgcatctccacgcaggaatggcggtggagggag
gcttcctacgactacgacaagaggttctacggacactgtaacaccacaactgacatcaag
gaggctaactttttcggcagtgaaggccagtacatagttgctgggtcagatgatggctca
atttacttctgggatcgaaggaacaccaacaacgtgcgtattctgcgaggtgatagctct
atcgttaactgtctgcaaccacaccccagctactgtctgttggctacaagtggcatcgat
cctcttgtgcgtctctggtctcctcgccgtgaggatgtggagaacaatcacgagatccgt
gaccgggactcagcggcaacttgtaatcagcgacggatgaaggctgatccatttgatgtt
gtgttgatgaacatgggataccgtgtgggtggagcaaacgatgaagcaaacgaggacgga
aacactcccacctataactgccacactagttag

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