Homalodisca vitripennis (glassy-winged sharpshooter): 124360371
Help
Entry
124360371 CDS
T09217
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog isoform X1
KO
K15176
RNA polymerase-associated protein CTR9
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvi03021
]
124360371
Transcription machinery [BR:
hvi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
124360371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_8
TPR_14
TPR_12
TPR_16
TPR_CcmH_CycH
TPR_17
TPR_11
TPR_7
TPR_10
TPR_6
TPR_9
TPR_Slam
ARM_TT21_4th
ANAPC3
PknG_TPR
Peptidase_S41_N
Motif
Other DBs
NCBI-GeneID:
124360371
NCBI-ProteinID:
XP_046669896
LinkDB
All DBs
Position
4:156099216..156160503
Genome browser
AA seq
1162 aa
AA seq
DB search
MAANSIEIPLRDTDEVIELYFDQLPEGDEVLGILRQETAQLHIWVNLALEYHKQGKIDDF
IKILESSRVDANVDYRDYEKDQMRALDMLAAYYVQQANHEKNKDKKRDLFAKANDLYTTA
DKIIMYDQNHLLGKAYFCLLEGDKMEQADAQFNFVLNQSTNNIPSLLGKACIAFNKKDYR
GALAFYKKALRTNPNCPAAVRLGMGHCFMKLGNQEKARLAFERALQLDSQCVGALVGLAI
LQLNRQQPEDIRTGVQMLSKAYTIDSTNPMVLNHLANHFFFKKDYHKVQHLALHAFHNTE
NEAMRAESCYQLARAFHVQADYDQAFQYYYQATQFAPPAFVLPNFGLGQMYIYRGDTENA
AQCFEKVLKAQPGNYETMKILGSLYASSSSQSKRDIAKNHLRKVTEQFPDDVEAWIELAQ
ILEQSDLNAALAAYGTATKILRDKVQADIPPEILNNVGALHYRLNNYEESRRSLEDSLAR
ARIEAEHDPQYYNSIAVTTTYNLARLNEALCQFDRAEKLYKDILKEHPNYVDCYLRLGCM
ARDKSQIYEASDWFKEALRIDNEHPDAWSLLGNLHLAKMEGGPGQKKFERILKNPATSTD
AYSQIALGNVWLQTLHQPCKDKAREKVCQDRALAMYNKVLRSDPRNIWATNGIGAVLAHK
GCVNEARDIFAQVREATADFCDVWLNIAHIYVEQKQHVSAIQMYENCLRKFYKYHHVEVL
QYLARAYFKAGKLKEAKITLLKARRVAPQDTVLLYNIALVLQRLAMQILKDEKSTLQTVL
QAVHELGLSHKYFQYLSVNGERMRYDVNVAGLEARQCQDLLFSQAQYHVARARRLDEEEK
QLRRKQEEERESFRLKQLEEQRAQEEKKKTQIEEMLQKRKEYKEKTKNALVFGDMPSEKK
PGKGRRKERDYVSDSGSEGPPGSPSQKKEKLQKRKKGEPGEKKKRGGGGRKKREKKAENL
GSDSDSDQPKRKRTKKEPKPKKSRARADDGLSAKQKMKIVSKATISTSESDSDSGKLKIA
SGNESGSDGGNAKRGRKRIDSGSGSGSSRSRSRSRSGSRSRSRSKSGSRRSRSGSGSRSR
SRSRSGSRSGSHSRSPSRSKSRSRSKSRSRSRSRSRSKSHSRDRSKSGSRSRSPSPETRK
SVSGSDDEGSNKGSKMSGSGSE
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaaattcaatagaaatacctcttagggatactgatgaagtaatcgaactttac
ttcgatcagttacccgaaggagatgaggtactgggcatcttacggcaagaaactgctcag
ctgcacatatgggtcaatcttgctttggagtaccataaacaagggaaaattgatgatttt
atcaagatactggagtcttctcgagtggatgctaatgttgactatcgagattatgagaag
gatcaaatgcgagccttggatatgcttgctgcatattatgttcaacaagcgaaccatgag
aagaacaaagacaagaaacgggatctttttgcaaaagcaaatgatttatataccactgca
gataaaatcatcatgtatgatcagaatcatctccttggaaaagcgtacttctgcctactg
gagggagacaagatggagcaagctgatgcacagtttaactttgttttaaatcagtccaca
aacaacattccatctcttctagggaaagcttgtatagccttcaataaaaaagattataga
ggtgctttagcattttacaaaaaagcattacgcactaatcctaactgccccgctgccgta
aggttaggcatgggtcactgtttcatgaaactaggaaatcaagaaaaagcaaggttagca
tttgaaagagcacttcaactagactctcagtgtgttggtgctttagtaggattggccatt
cttcagctcaaccgccaacagcctgaggatattaggactggagttcagatgctttctaaa
gcatacacaatcgactccacaaatcctatggttttaaatcatctagccaaccatttcttt
tttaaaaaggattaccacaaggtacaacatttagcgttacatgctttccacaatacagag
aatgaagctatgagagctgaaagttgttaccagttagctcgagctttccatgtacaggca
gactatgatcaagcttttcagtactactaccaagcaactcaatttgcaccacctgcattt
gtcctgccaaattttggattgggacaaatgtacatttacagaggagacacagaaaatgct
gcacaatgttttgagaaggtgctgaaagcgcaacctggaaattatgaaactatgaaaata
ttgggatcactatatgcaagttcatcaagccagtctaaaagagatattgccaaaaatcat
cttagaaaggtaacggagcagtttccagacgatgtagaagcttggatagaactagcacaa
atcctagagcagtcggatttaaatgcagcactagcagcatatggaactgctacaaaaatt
ttgagggataaagtacaggccgacattcctccagaaattttaaacaacgtaggagctcta
cattacaggctaaataattatgaggaatctcgtagaagcttggaggactcacttgctcga
gctaggatagaagctgaacatgatccacagtattacaattctattgctgtgacgacaaca
tacaacctcgctcggctgaatgaagcactatgtcagtttgatagagctgaaaaattgtac
aaggatattctgaaagaacatccaaattatgtggattgttacttgaggttaggttgtatg
gcaagagataaaagtcagatttatgaagcatctgattggttcaaggaagcactaagaata
gataatgaacatccagatgcatggtctcttttgggtaatttgcatcttgctaaaatggaa
ggaggacctggccaaaagaaatttgaacgtattttaaagaatccagcaacatcaaccgat
gcgtactctcagatagctctggggaatgtgtggttacaaacattacaccaaccttgtaaa
gataaggctcgtgaaaaggtttgtcaagacagagctttggctatgtacaacaaagtttta
cgtagcgatcctcgtaacatctgggcaactaatggcattggagcagtactagcacataaa
gggtgtgtcaatgaagcccgtgacatatttgctcaggtccgagaagcaacagctgacttc
tgtgatgtttggctaaatattgcacacatctatgttgaacaaaaacagcatgtcagtgcc
attcaaatgtatgaaaattgtctacggaaattctacaaatatcatcacgttgaagtactg
caatatttagcccgtgcttatttcaaagctggaaaactcaaagaagcaaaaatcactctg
ttgaaggccaggagggttgcaccacaagacacagtactcctgtacaatattgccctagtc
ctgcagcggctagctatgcagatacttaaggatgaaaagtcaactttgcagacagtgtta
caggcggtccatgagttgggtctctctcacaagtacttccaatacctgtcagtgaatggt
gagcgaatgaggtacgacgtaaatgtggcagggcttgaggcccgacaatgtcaggacttg
ttgttctcccaagcccaataccatgtggcacgtgccagacggcttgatgaagaagaaaaa
caactgagacgcaaacaagaagaggagagggagtcgttcagactcaaacaattagaagaa
cagcgtgctcaagaagaaaagaagaaaactcaaatagaagaaatgttacaaaaacgaaaa
gaatacaaagaaaagacaaagaatgctttagtatttggagacatgcccagtgagaagaaa
ccaggaaagggaaggcgtaaagaacgggattatgtgtcagattctggaagtgagggacct
cctgggagcccttcacagaagaaagagaaacttcaaaaacggaagaaaggagagccagga
gagaagaagaaacgaggaggaggtggtcgtaagaaaagagagaaaaaggctgaaaatttg
ggttctgattctgatagtgatcaacccaagcgcaagagaactaaaaaggaacctaaaccc
aaaaaatcaagagcaagagcagatgacggtttatcggccaagcagaaaatgaaaattgtc
tcaaaagctacaatatctaccagtgagtctgatagtgacagtggaaaactgaaaattgcc
agtggtaatgagagtggcagtgatggaggaaatgcgaaacgtggacgcaagcgaatagac
tctggaagtggctcaggatcatctagaagtagaagtagatcaagatcgggaagcagatca
agaagcagatccaaaagtggttcacgaagatcaaggagcggatctggatctcgttcaaga
tcgagatcaagaagtggttcgagatctggcagtcattctagatcacctagtagatcaaaa
tccagatcacggagcaaatccagaagcagatctagaagcaggagcagatctaagtctcat
tccagagatcgatcaaagtctggatcacgttctagatcgccttcaccagaaactcggaag
tctgtgtctggaagtgatgatgaaggatcaaataaaggcagtaaaatgtcgggaagtggc
agtgaatag
DBGET
integrated database retrieval system
