KEGG   Homalodisca vitripennis (glassy-winged sharpshooter): 124360455
Entry
124360455         CDS       T09217                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9 isoform X1
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
hvi  Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03020  RNA polymerase
hvi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    124360455
  09124 Replication and repair
   03420 Nucleotide excision repair
    124360455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hvi03021]
    124360455
   03400 DNA repair and recombination proteins [BR:hvi03400]
    124360455
Transcription machinery [BR:hvi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     124360455
DNA repair and recombination proteins [BR:hvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      124360455
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Zn_ribbon_recom Ogr_Delta SR1P Zn_Ribbon_TF DZR
Other DBs
NCBI-GeneID: 124360455
NCBI-ProteinID: XP_046670055
LinkDB
Position
4:159955983..159967287
AA seq 129 aa
MPISGYDTHDDGPGFVGIRFCQECNNMLYPREDKENKVLLYACRNCDYKTLADSNCIYVN
KIMHEIDELTHIVSDVISDPTLPKTEDHPCPKCSHREAVFFQAQTRRAEEEMRLYYVCTN
QHCTHRWTE
NT seq 390 nt   +upstreamnt  +downstreamnt
atgcctatcagtggctatgatactcacgacgatggtcccggatttgtaggaataagattt
tgccaagaatgcaataacatgttgtatccaagagaagataaggaaaataaggtgttgcta
tatgcttgccgaaactgtgactacaagacattggctgacagcaactgcatttatgtaaat
aaaattatgcacgaaatcgatgagttgacacacatagtgtctgatgtcatctctgatcct
acattgcccaagactgaagatcatccttgccctaagtgcagtcacagagaagcagtgttc
ttccaggcccaaacacgtcgagctgaggaagaaatgaggctttactacgtttgtaccaac
caacactgcactcatagatggactgaatag

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