Homalodisca vitripennis (glassy-winged sharpshooter): 124362054
Help
Entry
124362054 CDS
T09217
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
hvi
Homalodisca vitripennis (glassy-winged sharpshooter)
Pathway
hvi03030
DNA replication
hvi03410
Base excision repair
hvi03420
Nucleotide excision repair
hvi03430
Mismatch repair
hvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124362054
03410 Base excision repair
124362054
03420 Nucleotide excision repair
124362054
03430 Mismatch repair
124362054
03440 Homologous recombination
124362054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hvi03032
]
124362054
03400 DNA repair and recombination proteins [BR:
hvi03400
]
124362054
Enzymes [BR:
hvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124362054
DNA replication proteins [BR:
hvi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
124362054
DNA repair and recombination proteins [BR:
hvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
124362054
MMR (mismatch excision repair)
DNA polymerase delta complex
124362054
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
124362054
NCBI-ProteinID:
XP_046672164
LinkDB
All DBs
Position
5:complement(40690514..40733034)
Genome browser
AA seq
1104 aa
AA seq
DB search
MDWKRKAGSHGKKNTNNPKKFRSNVDDDEDIPASFEEELAIMDQMEMEANETESQESSEQ
GPDTQQTSAKWSRPPPPHLNPASDKLIFQQIDIDHYTGTPLAGMPGSQVAPVPVMRMYGV
TADGNSVCCHVHGFTPYFFVSAPEDFTETHCRPFKAALNKAVMADMRGNRDNIQEAVLEV
ELVRKINLFGYNGNDPSPFLKVTVALPRLIAPSKRLLEKENVYPTFQNHRYRAFESNVDF
DIRFMVDNHMTGCCWVELPPGQWKLRGCHPHSNLTLPTVSRCQLEVDVSFKEIIAHQPEG
EWGKVAPFRILSFDIECAGRKGIFPEPNHDPVIQIANMVIRQGESEPFVRNVFTLDTCAA
IVGCQVLSHDKEVDMLEKWAEFVREVDPDLFTGYNINNFDFPYLINRANHLKAKNFTFLG
RIKNIRSVIKEQVLQSKQMGRRENKHVNFEGRVPFDLLLCLLRDYKLRSYTLNAVSYHFL
QEQKEDVHHNIISDLQNGTPQTRRRLAVYCLKDAYLPLRLLEKLMCIINYMEMSRVTGVS
LSSLLTRGQQIKVVSQLLRSAKEKGFVMPAYQGGVQEEQFEGATVIEPKKGYYADPVATL
DFSSLYPSIMMAHNLCYTTLLQGNAREKYGLTPDQYSKTPANNFFVKSSVRKGILPEILE
NLLSARKKAKLDLKNETDEFKKKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVT
AYGRTMIEQTKQEVEDKYCIRNGYDHDAVVIYGDTDSVMVKFGVSSLEEAMKLGQEAADY
VSSKFIKPIKLEFEKVYFPYLLINKKRYAGLYFTKTDTYDKMDCKGLETVRRDNSPLVSN
MINMCLQKLLIERNPDGAVAYAKQVISDLLCNRIDISQLVITKELTKQDKDYTAKQAHVE
LAHKMRKRDPGNAPKLGDRVPYVIIAASKGTPAYQKAEDPIYVLDNNIPIDSTYYLENQL
SKPLLRIFSPILGDKAESILLRGDHTRTKAVVTSKVGALAAFTTKKQTCLGCKAVLPTQQ
ENQPLCQHCLPNQAKLYMQELNKLQEMETRFCRLWTECQRCQGSLHEEVLCSSRDCPIFY
MRKKVQMDLTTQDKAIQRFGNPTW
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggattggaaaaggaaggccggttctcatggaaagaaaaatacaaataaccctaaaaag
tttaggtccaatgtggatgatgatgaggatataccagcttcgttcgaggaagaactggcc
atcatggaccagatggagatggaagcaaatgaaactgagtcacaggaatcatctgaacag
ggtccagacactcagcagacgagtgcaaagtggagtcgtccaccccctccccacctcaac
cctgcttcagacaagctcatctttcagcagatagacattgaccactacacaggaacccca
ttagcgggaatgcctggttcccaagtggctccagtcccggtaatgagaatgtatggagta
acagcggatgggaattctgtctgctgtcatgtccatggtttcacgccttacttcttcgtc
tctgccccagaagactttacggagactcattgcaggccatttaaggcagcactgaacaaa
gcagtgatggcagacatgagagggaaccgagacaacatccaggaggcggtgttggaagtg
gaactggtccgcaaaatcaacctatttggttacaatggcaatgatccctcaccattcctc
aaagtcactgttgccctcccacgtcttatcgctccctccaagcggctcttagagaaggaa
aatgtctaccctacattccagaaccacagatatagggcatttgagtcaaatgttgacttt
gatatcaggttcatggtggacaaccacatgacagggtgctgctgggttgagttgcctcct
ggacagtggaaactgcgaggatgtcacccccactccaatctgacacttcctactgtgtct
cggtgtcagctggaggtggatgtgtcattcaaggagatcatcgctcaccaacctgaaggg
gagtgggggaaagttgcgcccttccgtattctcagctttgacatagaatgtgccggccgg
aaaggtattttcccggaaccaaaccatgacccagtgatacagatagccaacatggtgata
agacaaggagagtctgaaccttttgtcagaaatgtattcaccttggacacttgtgctgct
attgtcggctgtcaagtactaagccacgacaaagaggttgacatgttggagaaatgggca
gaatttgtgcgtgaagtggacccagatttgttcactggttacaacatcaataactttgac
tttccatacctgatcaacagagcaaaccatctcaaggccaagaactttacttttctggga
agaataaaaaacatcaggtctgtgattaaagagcaagttcttcaaagtaaacagatgggg
cgtcgtgagaacaagcacgtcaactttgagggcagagtccctttcgatttgcttctgtgt
ttgctacgggactacaagctgcgctcatacactctcaatgctgtaagttaccatttcctg
caggaacagaaggaagatgttcatcataacatcatatcagatttgcagaatggcactcca
caaactcgcagaaggctggcagtgtactgcctgaaagatgcatacctgcccttgaggctg
ctagagaaactcatgtgcatcatcaactatatggaaatgtccagagtcactggagtgtcc
ctgtccagtctgctcaccagagggcagcagatcaaagtcgtctcacagctgttgcgttcg
gccaaggagaaggggtttgtgatgccagcgtatcaagggggagtccaggaggagcagttt
gagggagctactgttatagagccaaagaaaggctactacgcagacccagtggctactctt
gattttagctctctgtatccgagcatcatgatggcgcacaacttgtgctatacaactctc
cttcaaggcaacgccagggaaaaatacggattaaccccggaccagtattccaagactcca
gcaaacaacttctttgttaagagttcagtgagaaaaggaattctaccggagattcttgaa
aatctgctgagtgcccgaaaaaaagctaagctagatctgaagaacgaaacagatgaattc
aagaagaaggtgttggatggacggcagttggctttaaaaatcagtgccaactctgtttat
ggttttactggggctcaagtgggaaagctgccctgtcttgaaatttctggtagtgtcacc
gcttatggacgaaccatgatagagcaaactaagcaggaggtggaagacaaatactgcatc
agaaatggctatgaccatgacgctgttgtaatctacggtgacactgactctgtgatggtc
aagttcggagtgagcagtctggaggaggcaatgaagttgggacaggaggcagctgactat
gtgtcctccaagttcatcaaacccatcaaacttgaatttgaaaaggtgtacttcccgtac
ctgttgataaacaagaaacgctacgccggactctacttcaccaagacggacacatacgac
aagatggactgcaaggggctggagactgtgcggcgtgataactcacctcttgtctccaac
atgatcaacatgtgtttgcagaaattgctcattgagaggaatccagatggagctgtggca
tatgccaagcaagtgatcagcgacttgctatgcaaccgtatcgatatctcgcagctggtg
atcaccaaggagctgactaagcaagacaaggactatacagccaagcaggctcatgtagag
ttggcacataaaatgaggaagagagaccctggcaatgcacccaagctaggggacagagta
ccctacgtcatcatagctgctagcaagggcacacctgcataccagaaagccgaggacccc
atatatgtattggataacaacatccccatagactccacatactacttggagaaccaactg
tccaagcctctcctcaggatattctcacccatccttggtgacaaggcagagtccattcta
cttcggggagaccacacgagaacaaaagcagtggttacctcaaaagtgggagctcttgct
gccttcactaccaagaaacagacgtgtctagggtgcaaggcagtgttgccaacccaacag
gagaaccagccgttgtgtcagcactgtctacctaaccaggccaagctctatatgcaggag
ctaaataagttgcaggagatggagaccaggttttgtcgtttgtggactgagtgtcagaga
tgtcaaggcagtcttcatgaggaggtcctctgctccagtcgagattgccccatcttctac
atgcgcaagaaggtgcagatggatttgacgactcaagacaaagccattcagagatttggc
aaccctacttggtga
DBGET
integrated database retrieval system
